TCONS_00065270-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065270-protein
Unique NameTCONS_00065270-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length443

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065270-protein ID=TCONS_00065270-protein|Name=TCONS_00065270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MMPRSFLLKNYYPRNDMEDIQAAAANLLDLASSAPAPKEKIVNDVLRYND
LLKWNYEYEKSYWFDTSAMNERNNPYQPHEDGTSSSPASSNASCSPQRYG
ASTSGSSSSCELSPKESDLIIPRALATGDFSTKTFMNTTIQPAADDFVES
ARITESDTLQTEMKVPEELKVPPKLNPITPPVITTTPPVATTTTINTSAL
TDDNEDHLSSLFDKTLETTEQAIRQFFDNNRLNADDISEDTGLDKLNLQN
FMDGLTDLPVDDKTELYRWYLNKMQKLTNKDTLEAKTDESYTCHKCGKIF
TYKSYLERHIKYVCPDSAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPY
KCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTH
TGEKPYKCWQCGKSFSQSGSLQTHVHTHSKEHSLNKGKKKLAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040923XLOC_040923Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065270TCONS_00065270Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 350..372
e-value: 2.5E-4
score: 30.4
coord: 406..428
e-value: 9.4E-4
score: 28.5
coord: 378..400
e-value: 5.6E-5
score: 32.5
coord: 291..311
e-value: 6.3
score: 15.1
coord: 322..344
e-value: 0.0018
score: 27.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 352..372
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 408..428
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 324..344
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 380..400
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 322..349
score: 15.438
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 378..405
score: 17.974
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 406..433
score: 13.755
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 291..321
score: 10.699
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 350..377
score: 17.059
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 372..424
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 330..387
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 289..331
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 350..372
e-value: 3.3E-6
score: 27.2
coord: 323..344
e-value: 1.2E-4
score: 22.3
coord: 291..311
e-value: 3.3E-5
score: 24.0
NoneNo IPR availableGENE3D2.40.155.10coord: 307..356
e-value: 7.9E-24
score: 84.5
NoneNo IPR availableGENE3D3.30.160.60coord: 357..371
e-value: 8.1E-14
score: 50.8
NoneNo IPR availableGENE3D3.30.160.60coord: 391..414
e-value: 5.5E-21
score: 74.2
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 392..416
e-value: 2.3E-11
score: 43.4
NoneNo IPR availableGENE3D3.30.160.60coord: 256..297
e-value: 2.1E-5
score: 23.9
NoneNo IPR availableGENE3D3.30.160.60coord: 298..306
e-value: 9.9E-4
score: 18.7
NoneNo IPR availableGENE3D3.30.160.60coord: 372..390
e-value: 1.0E-18
score: 66.7
NoneNo IPR availableGENE3D3.30.160.60coord: 415..441
e-value: 1.5E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..114

Blast
BLAST of TCONS_00065270-protein vs. Swiss-Prot (Human)
Match: ZN333 (Zinc finger protein 333 OS=Homo sapiens GN=ZNF333 PE=2 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 8.509e-43
Identity = 73/144 (50.69%), Postives = 101/144 (70.14%), Query Frame = 0
Query:  288 DESYTCHKCGKIFTYKSYLERHIKYVCPDSAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHSKE 431
            D+SY C+KC K F Y S L RH K     +A + + C  CG+AF+Y   LRRH+R+HTGE P++C +C + F R+ +L  H RNHTGEKPY C  C +AF + + L+ H+RTHTGEKP++C QCGK+F +  SL+TH+ TH++E
Sbjct:  363 DKSYACNKCEKSFRYSSDLIRHEKT---HTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGEKPFECSQCGKAFREHSSLKTHLRTHTRE 503          

HSP 2 Score: 135.961 bits (341), Expect = 1.449e-34
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0
Query:  288 DESYTCHKCGKIFTYKSYLERHIKYVCPDSAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHS 429
            ++ Y C  CGK F   S L  H++     +  + ++C+ CGKAF+    L+ H+R+HT E PY+C++C + F  ST L  H R HTGEK Y C  C +  +R + LK HMRTHTGEKPY C +CG++FS+  SL+ H  THS
Sbjct:  447 EKPYECKDCGKAFNQPSSLRSHVRT---HTGEKPFECSQCGKAFREHSSLKTHLRTHTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHS 585          

HSP 3 Score: 132.109 bits (331), Expect = 2.993e-33
Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 0
Query:  288 DESYTCHKCGKIFTYKSYLERHIKYVCPDSAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHS 429
            ++ + C +CGK F   S L+ H++     +  + ++C  CGK F+   +L  H R HTGE  Y+C  C +   R + L+ H+R HTGEKPY C +C RAF+  + L++H RTH+G+KPY C +CG++F QS  L  HV THS
Sbjct:  475 EKPFECSQCGKAFREHSSLKTHLRT---HTREKPYECNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHSGKKPYACQECGRAFGQSSHLIVHVRTHS 613          

HSP 4 Score: 130.954 bits (328), Expect = 7.420e-33
Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = 0
Query:  288 DESYTCHKCGKIFTYKSYLERHIKYVCPDSAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHSKEHSLNKGKKKLAL 443
            ++ Y C++CGK F   ++L  H +     +  + ++C  CG+       L+ H+R+HTGE PY C +C RAF   + L++H R H+G+KPY C +C RAF +S+ L  H+RTH+  +PY+C QC K+F  S SL  H  TH    ++  G   L++
Sbjct:  503 EKPYECNQCGKPFRTSTHLNVHKRI---HTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYVCQECGRAFSEPSSLRKHARTHSGKKPYACQECGRAFGQSSHLIVHVRTHSAGRPYQCNQCEKAFRHSSSLTVHKRTHVGRETIRNGSLPLSM 655          

HSP 5 Score: 125.561 bits (314), Expect = 6.302e-31
Identity = 55/115 (47.83%), Postives = 80/115 (69.57%), Query Frame = 0
Query:  317 SAGRTWKCTYCGKAFQYPCYLRRHIRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHSKE 431
            S  +++ C  C K+F+Y   L RH ++HT E  + C +C +AF  S++L+RH+R HTGEKP+ C+QC + F R+ +L  H R HTGEKPY+C  CGK+F+Q  SL++HV TH+ E
Sbjct:  361 SGDKSYACNKCEKSFRYSSDLIRHEKTHTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHVRTHTGE 475          

HSP 6 Score: 98.2117 bits (243), Expect = 7.895e-22
Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 0
Query:  341 IRSHTGESPYKCDKCDRAFVRSTDLQRHIRNHTGEKPYRCTQCSRAFARSTDLKRHMRTHTGEKPYKCWQCGKSFSQSGSLQTHVHTHSKE 431
            IRS  G+  Y C+KC+++F  S+DL RH + HT EK + C +C +AF  S++L+RHMRTHTGEKP++C QCGK+F+++ +L  H   H+ E
Sbjct:  359 IRS--GDKSYACNKCEKSFRYSSDLIRHEKTHTAEKCFDCQECGQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGE 447          
The following BLAST results are available for this feature:
BLAST of TCONS_00065270-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3338.509e-4350.69Zinc finger protein 333 OS=Homo sapiens GN=ZNF333 ... [more]
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