TCONS_00065163-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065163-protein
Unique NameTCONS_00065163-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065163-protein ID=TCONS_00065163-protein|Name=TCONS_00065163-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1179bp
MTWLSTFYLRAFVVLLQITCILSNDDYGPLPGFKQQPIDTLIESHNQSVV
CSIRGEKPLTVTWRKENLVLDSKKLKYLSVSKEGSLTLYNTQRGRDEGNW
RCQVSNSYGTVLSRSAKVTFPYMNEFSEHDLRITIEEGQPALLACYAPDS
YPDRYIHWLKLRNRGHFPLQLDTNSHFTTSLDGDLYFSYTTRSDEGVYYC
SVENSKLRRFERRTVSLKVTRKARQSNAPPKIWEFSDRIAMKDSNFVLEC
IAYGRPVPVMRFRNAKTGEELSGSQQIGNRLRYQFGRFGKQHEGEYLCEA
ENAYGEKANKTAYLKMESQPEIMEENEFHSIDRAIDSELILPCVANSIPQ
ASYTWLFNAAPIDDTKNKDIEIHQGTLKISKLMKYHQGFYQCIAHNQHGE
DLKTIYVTVVEYAPDFKKQSSIPPATSTQALIGGTAIINCVPNGAPVPKV
YWKKLNTTLDVVTFDPRVRQTSTGSLEIRDIKKSDEGIYVCVATNKLGTD
EAAGELKVNGGLAITEPLSDVSFVRTGNTITLTCKYNSNENVEIKFEWKF
GRRTIRRTRRYNIKSSKFKRQSILTIKNAVFKDTGLYTCKVVGTKQRSAE
KTQRITVSDSDGGPDIPIRPPGVKTTTVPFLKTTRRTIRGPPDPPTHVTA
TDLSGLNIKISWSLGRENGAPTTKVYIQARTSFDLDVWHTIKVSNKTEGY
RFSEIVEMSPWIEFRIRVISENKHGKSKPSEETSKWIRTPTAKPMKYPTN
IHGKGTGPSELTVSFDPLDEIDQNAPGIEYIVHYREKGTSYGLIQRKVPK
DQHSLKLSFINDDSYYRPYEFQIQAKNKDGYGPMSPVHIAYTGERVPITV
PTNLKVKLDDEMNAVALWDEVSKTRNAMRGKFQGYKFIYWKEPKENYPVI
ERYEVTKAESIQVRLKAHSTYYFQVLAFNNVGDGPRSIRYGAITTPEGIP
TPPTNFKIIDASQGEVTLSWTEPLHKNGVIEKYLLTYISMKTNKKQQGNL
RSDERTFKLKNLAPNEPYLFKLAAVTGAGISEESEISFDLSKVPSYKLEA
PIVKSIGYNAIVLTWLAVAPTVDISGYKLFYRKENEAEEKALALWEQSND
IVSTVHNLDSGTTYYFQIAVVNQYGTGPKSKVTIAATKFKEGEPPRRATE
AGKQSTSVKLTLSSYLVGILVLIALLVPR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040859XLOC_040859Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065163TCONS_00065163Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR013151Immunoglobulin
IPR007110Ig-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 847..934
e-value: 2.9
score: 16.1
coord: 1044..1127
e-value: 2.2E-4
score: 30.6
coord: 745..832
e-value: 0.11
score: 21.6
coord: 950..1031
e-value: 4.1E-12
score: 56.2
coord: 642..727
e-value: 0.016
score: 24.4
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 748..835
e-value: 1.4E-8
score: 34.8
coord: 1051..1130
e-value: 1.4E-8
score: 34.8
coord: 952..1034
e-value: 3.9E-16
score: 59.1
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1047..1140
score: 14.888
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 644..742
score: 14.809
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 747..845
score: 15.645
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 850..948
score: 13.349
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 952..1046
score: 18.872
IPR003961Fibronectin type IIICDDcd00063FN3coord: 1049..1137
e-value: 1.11919E-8
score: 52.8839
IPR003961Fibronectin type IIICDDcd00063FN3coord: 851..944
e-value: 5.66479E-5
score: 41.7131
IPR003961Fibronectin type IIICDDcd00063FN3coord: 950..1035
e-value: 1.8885E-15
score: 72.9143
IPR003961Fibronectin type IIICDDcd00063FN3coord: 748..842
e-value: 5.54047E-9
score: 54.0395
IPR003961Fibronectin type IIICDDcd00063FN3coord: 642..734
e-value: 9.29273E-8
score: 50.1875
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 888..1037
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 1042..1137
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 640..847
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 328..410
e-value: 5.2E-4
score: 29.3
coord: 425..509
e-value: 3.2E-9
score: 46.6
coord: 130..220
e-value: 1.6E-7
score: 41.0
coord: 519..608
e-value: 1.3E-8
score: 44.7
coord: 36..121
e-value: 2.3
score: 17.0
coord: 235..317
e-value: 1.2
score: 18.1
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 525..596
e-value: 0.007
score: 25.6
coord: 136..207
e-value: 0.042
score: 20.3
coord: 431..498
e-value: 7.5E-14
score: 62.0
coord: 334..399
e-value: 3.2E-4
score: 30.0
coord: 42..109
e-value: 0.031
score: 21.6
coord: 241..305
e-value: 0.002
score: 27.4
NoneNo IPR availablePFAMPF13927Ig_3coord: 333..396
e-value: 3.6E-8
score: 33.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..625
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 845..942
e-value: 1.0E-9
score: 38.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 127..228
e-value: 3.8E-14
score: 52.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 741..844
e-value: 7.9E-14
score: 51.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 413..506
e-value: 2.2E-17
score: 62.9
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 943..1039
e-value: 2.4E-19
score: 69.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 507..612
e-value: 8.1E-14
score: 51.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 631..740
e-value: 3.4E-11
score: 42.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 322..410
e-value: 1.9E-16
score: 59.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1040..1142
e-value: 4.1E-14
score: 52.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 31..126
e-value: 7.8E-13
score: 47.8
coord: 231..321
e-value: 5.4E-10
score: 38.7
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 47..111
e-value: 1.1E-7
score: 31.7
coord: 426..508
e-value: 1.1E-12
score: 47.7
coord: 514..602
e-value: 3.0E-9
score: 36.7
IPR013151ImmunoglobulinPFAMPF00047igcoord: 134..206
e-value: 1.3E-4
score: 21.9
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 414..509
score: 11.261
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 121..216
score: 12.205
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 517..606
score: 10.862
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 320..408
score: 9.355
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 31..119
score: 10.353
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 522..609
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 424..510
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 133..206
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 229..298
coord: 343..410
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 40..121

Blast
[Close]
BLAST of TCONS_00065163-protein vs. Swiss-Prot (Human)
Match: CNTN4 (Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 4.234e-102
Identity = 276/1045 (26.41%), Postives = 457/1045 (43.73%), Query Frame = 0 
Query:   12 FVVLLQITCILSNDDYGPLPGFKQQPIDTLI----ESHNQSVVCSIRGEKPLTVTWRKENLVLDS-KKLKYLSVSKEGSLTLYNTQRGRDEGNWRCQVSNSYGTVLSRSAKVTFPYMNEFSEHDLR-ITIEEGQPALLACYAPDSYPDRYIHWLKLRNRGHFPLQLDTNSHFTTSLDGDLYFSYTTRSDEGVYYCSVENSKL-RRFERRTVSLKVTRKARQSNAPPKI-WEFSDRI-AMKDSNFVLECIAYGRPVPVMRFRNAKTGEELSGSQQIGNRLRYQFGRFGKQHEGEYLCEAENAYGEKANKTAYLKMESQPEIMEENEFHSIDRAIDSELILPCVANSIPQASYTWLFNAAPIDDTKNKDIEIHQGTLKISKLMKYHQGFYQCIAHNQHGEDLKTIYVTVVEYAPDFKKQSSIPPATSTQALIGGTAIINCVPNGAPVPKVYWKKLNTTLDVVTFDPRVRQTSTGSLEIRDIKKSDEGIYVCVATNKLGTDEAAGELKVNGGLAITEPLSDVSFVRTGNTITLTCKYNSNENVEIKFEWKFGRRTIRRTRRYNIKSSKFKR------QSILTIKNAVFKDTGLYTCKVVGTKQRSAEKTQRITVSDSDGGPDIPIRPPGVKTTTVPFLKTTRRTIRGPPDPPTHVTATDLSGLNIKISWSLGRENGAPTTKVYIQARTSFDLDVWHTIK-VSNKTEGYRFSE-IVEMSPWIEFRIRVISENKHGKSKPSEETSKWIRTPTAKPMKYPTNIHGKGTGPSELTVSFDPLDEIDQNAPGIEYIVHYREKGTSYGLIQRKVPKDQHSLKLSFINDDSY-YRPYEFQIQAKNKDGYGPMSPVHIAYTGERVPITVPTNLKVKLDDEMNAVALWDEVSKTRNAMRGKFQGYKFIYWK-EPKENYPVIERYEVTKAESIQVRLKAHSTYYFQVLAFNNVGDGPRSIRYGAITTPEGIPTPPTNFKIIDASQGEVTLSWTE--PLHKNGVIEKYLLTYISMKTNKKQQGNLRSDERTFKLKNLAPNEPYLFKLAAVTGAGISEESE 1035
             +VL      L++D     P F Q+P   +     E     + C ++G     + W+     +D+    +Y  V  EGSL + N  + +D G ++C  +NS+GT++SR AK+ F Y++ F       +++  GQ  +L C  P    +    W+       +P   D N  F +   G+LY +   +SD G Y C V N+    +       L +          PKI  +F + +   K +   LEC A G PVP + +R A        +++  +    +   F ++  G Y C AEN+ G+   +   L   +QP  ++  + + I  A++  +   C AN  P+ +Y WL N  P+  T+++ I+I QGTL I+ +     G YQC+A N+HG       ++V+   PDF +         T   +GG  +I C P  +P P   WKK     D++  + R+  +  G+L I ++ KSD G Y C+ATN  GT  + G L V     +  P S +  V  G +I L C+   + +++I F W F    I   R        F+R         L I+N   K  G Y C V  +  R +     I                                +RGPP PP  VT  +++    ++SW  G +N +P T   IQART F +  W  +  V    +G  F+  +V ++PW+E+  R ++ N  G  +PS  + K  RT  A P   P N+ G G   SEL ++++ + E  QN  G  Y+V +R  G    ++      D  + +  F N+  + + P+E ++   N  G GP SP  + Y+ E  P   P ++  +     +    W   +      RG+ QGY+  YW+ E KE      R    +  +    LK    Y+  V A+N+ G GP S     +TT +  P+ P    I ++S  ++ L+W +   L     ++ Y + Y   + N++   ++    +T    +L  +E Y+ ++   +  G    SE
Sbjct:    7 LLVLQSFILCLADDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVV--EGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWI----FNEYPSYQD-NRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVAR-GQLTFYAQPNWIQ--KINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPL-LTRDR-IQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLL---KRVTLVKVGGEVVIECKPKASPKPVYTWKK---GRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMD-VTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDR----DGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLI--------------------------------VRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVG-WQAVSTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEK-RRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLASAD--ASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFW---ASPLEKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVN-VTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLY---RWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSE 985
The following BLAST results are available for this feature:
BLAST of TCONS_00065163-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTN44.234e-10226.41Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1[more]
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