TCONS_00065115-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065115-protein
Unique NameTCONS_00065115-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length639

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065115-protein ID=TCONS_00065115-protein|Name=TCONS_00065115-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
MLKEVSRVSQGPQNEHLRQQAISCETSATSTPGYITPPKFENMTDDEISL
NGDSQNKKVKFNDVREVRSLAKRHAEAQILSRMSHNSVEELRSILLSLDQ
KLPLKETIKLSVYFVVLWVFATLGYQAALANTTPSVANILSATSGIFTLC
FAACFPSSSADXDHGKLPLKEKNLLELKKCRRKKKQEFILGVIVLLVVDF
IWVGSAELSDYIFKENKYDKPYFTTYFKTVFFSVYLIGFCFVRNWQYQIK
QSCTRGLPTKKMLKEVSRVSQGPQNEHLRQQAISCETSATSTPGYITPPK
FENMTDDEISLNGDSQNKKVKFNDVREVRSLAKRHAEAQILSRMSHNSVE
ELRGILLSLDQKLPLKETIKLSVYFVVLWVFATLGYQAALANTTPSVANI
LSATSGIFTLCFAACFPSSSADWFNFSKLLSVLVSFGGVFIVCWTDPAKK
DSTVNIGDLYAIGGAILYATYLVLIRRKVGEDRKLDMPLFFGFVGLFGAL
FFWPGFFILHYTNVERFELPPDLKTWLLLILNAAIGTLLSEILWLWGCFL
TSSLLATLSLGLVAPLSMAFDIIVHKVQFSYLFFLGVAPILISFVVVSLL
THYEGYDPVMNCFSKIFGNTKQEPNPDERESLLENDAVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040822XLOC_040822Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065115TCONS_00065115Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 456..598
e-value: 1.3E-7
score: 31.7
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 362..447

Blast
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BLAST of TCONS_00065115-protein vs. Swiss-Prot (Human)
Match: S35F5 (Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 7.728e-116
Identity = 197/468 (42.09%), Postives = 287/468 (61.32%), Query Frame = 0 
Query:  184 KKQEFILGVIVLLVVDFIWVGSAELSDYIFKENKYDKPYFTTYFKTVFFSVYLIGFCFVRNWQYQIKQSCTRGLPTKKMLKEVSRVSQGPQNEHLRQQAISCETSATSTPGYITPPKFENMTDDEI-SLNGDSQN----KKVKFNDVREVRSLAKRHAEAQILSRMSHNSVEELRGILLSLDQKLPLKETIKLSVYFVVLWVFATLGYQAALANTTPSVANILSATSGIFTLCFAACFPSSSADWFNFSKLLSVLVSFGGVFIVCWTDPAKKDSTVNIGDLYAIGGAILYATYLVLIRRKVGEDRKLDMPLFFGFVGLFGALFFWPGFFILHYTNVERFELPPDLKTWLLLILNAAIGTLLSEILWLWGCFLTSSLLATLSLGLVAPLSMAFDIIVHKVQFSYLFFLGVAPILISFVVVSLLTHYEGYDPVMNCFSKIFG------NTKQEPNPDER-ESLLENDAVA 639
            +++   LG+++LL+VD IWV S+EL+ Y+F   +Y+KP+F+T+ KT  F +YL+GF   + W    +Q CTRGL  K      +      +         +   S+ S P Y+ P KF ++  ++  S N D++      +V+F+++ E+R L   HA    LSRMS+  V+E   IL ++  KL   +  K+S +F  +W  A L YQ AL++T  ++ NILS+TSG+FTL  AA FPS+S D F  SKLL+V++S GGV +V      K      +G ++++ GA+LYA Y+V+I+RKV  + KLD+P+FFGFVGLF  L  WPGFF+LHYT  E FE P  +   + +I+N  IGT+LSE LWLWGCFLTSSL+ TL+L L  PLS+  D+ + KVQFS+LFF G  P+  SF +V+LL HY  +DPVM    +IF         ++ P   E+ ESL+   +V+
Sbjct:   65 QRRRMALGIVILLLVDVIWVASSELTSYVF--TQYNKPFFSTFAKTSMFVLYLLGFIIWKPW----RQQCTRGLRGKH-----AAFFADAEGYFAACTTDTTMNSSLSEPLYV-PVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSY-PVKEQESILKTVG-KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKV-VLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRKHRIQRVPEDSEQCESLISMHSVS 517

HSP 2 Score: 91.6633 bits (226), Expect = 2.052e-19
Identity = 57/140 (40.71%), Postives = 86/140 (61.43%), Query Frame = 0 
Query:   27 SATSTPGYITPPKFENMTDDEI-SLNGDSQN----KKVKFNDVREVRSLAKRHAEAQILSRMSHNSVEELRSILLSLDQKLPLKETIKLSVYFVVLWVFATLGYQAALANTTPSVANILSATSGIFTLCFAACFPSSSAD 161
            S+ S P Y+ P KF ++  ++  S N D++      +V+F+++ E+R L   HA    LSRMS+  V+E  SIL ++  KL   +  K+S +F  +W  A L YQ AL++T  ++ NILS+TSG+FTL  AA FPS+S D
Sbjct:  158 SSLSEPLYV-PVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSY-PVKEQESILKTVG-KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGD 294
The following BLAST results are available for this feature:
BLAST of TCONS_00065115-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35F57.728e-11642.09Solute carrier family 35 member F5 OS=Homo sapiens... [more]
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