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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00064770-protein ID=TCONS_00064770-protein|Name=TCONS_00064770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=716bp
ITDDGVSRKAFYSIFQIYFTSQLNMAKIHLICQIHFIVFFFFSEIKIYHK
LAATTDSTIKMSAERMLPAMDVHQINESHEKQYRLSRTRYPTQDSNDQFE
LFVCVYNPDHKVNSKTWSKHIRNCSKLHSFPTKICQYNALHHVPYPEYEW
HMMTCLDKHNLAQDFAAARPMATTVNHNPDWVKPDCDEDWDEEAEESPQA
SFSIDARKAMPIHLYTKEDQAPTEDDDDGGYYGDDGFYYDAEGGHVAADG
IYYDKDGGYWDEDGYYYDKYGGYTAEDGSYVPGEGYTEGPNGEQAPVVAA
PVPASPQRQSVLNQELLLERPANWEQMSSTAKKNYKKKYNKQRQRMQEEG
VTEEDFKPSKDPHDWTEERREAKLAAIKAKFPLAPDKQNSAKFDYSSLLN
IVCQKCRIHLPEFRECPGLSGGFGYQCRVGQVWYQGMDFCTTKKDAKHEC
SKWALLGMEVPGIDNEQQVSQSGRSKPVHPRLAADLQKQREADEVGRLMA
SNMYDMQKKNVTPLRQPNIQQSPKVVSPAPAPAPPQQQPQQHQQPPQQNQ
QQPSQQTRGWGQKPSNSTPQPGFGQAQAATPATNQTQNRQPQGWGQQPQS
TPAGWGQQQQQQPTQQKPQQQQQATGGWSQQQRQQPTQQKPQQQQQAAGG
WGQQQRQQPTQQKPQQQQQAAGGWGQQSGSLVNGMQKMTMQDDFPALGGG
APKNEWSTVSKKSNGE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR022776 | TRM13/UPF0224_CHHC_Znf_dom |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 1.10.110.10 | | coord: 72..693
e-value: 7.0E-18
score: 64.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 466..490 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 333..365 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 521..716 |
| None | No IPR available | SUPERFAMILY | 54768 | dsRNA-binding domain-like | coord: 365..461 |
| IPR022776 | TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain | PROSITE | PS51800 | ZF_CHHC_U11_48K | coord: 132..159
score: 11.986 |
| IPR022776 | TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain | PROSITE | PS51800 | ZF_CHHC_U11_48K | coord: 101..128
score: 11.773 |
Blast
The following BLAST results are available for this feature:
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