TCONS_00064594-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064594-protein
Unique NameTCONS_00064594-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064594-protein ID=TCONS_00064594-protein|Name=TCONS_00064594-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MAAQLRTKKGKSKPTLLNRLELNGDIIFAAVFIPHEDSIITLGADKSIRV
WVMRDNGKYWPSVFHHMPDVGHSLDFNKESGKVFVGMAQGTIHEYDLSDD
VNTLTLARNYLAHTKRVNGTFFSLDYNWLLSCGNDKQFQWHCTKSGRRIG
GYSAAKAPCTCLQFDSHSCYAFMGDRGGEIHVFKLSENSLKPVTILKGHS
GGILSLTWDEERKLLFSGSADQSIIIWDIGGQKGSAVELHGHRGCVHNVS
LTSNTKKLLSYGEDRMLVMWDMTVERKETPNWSQSDMCEKCASPFFWNFK
QMWDQKIVGVRQHHCRKCGRAVCQKCSNKMSVLPKFGYEHEVRLCQECFL
TIKEEDKVSTTGFYELKHGASHLQIDHSRGRMLTCGSDDVVMIWDVKEFL
NEHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040505XLOC_040505Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064594TCONS_00064594Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR001680WD40_repeat
IPR013083Znf_RING/FYVE/PHD
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 277..354
e-value: 7.6E-19
score: 78.6
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 283..352
e-value: 3.0E-14
score: 52.8
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 232..271
e-value: 0.36
score: 19.8
coord: 145..184
e-value: 12.0
score: 10.1
coord: 13..52
e-value: 1.5
score: 15.8
coord: 359..395
e-value: 1.8
score: 15.4
coord: 103..142
e-value: 2.0
score: 15.2
coord: 189..228
e-value: 3.4E-9
score: 46.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 191..228
e-value: 3.2E-6
score: 27.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 239..272
score: 10.843
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 196..229
score: 14.686
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 275..349
e-value: 7.1E-15
score: 54.1
NoneNo IPR availableGENE3D2.80.10.50coord: 350..403
e-value: 0.039
score: 13.1
NoneNo IPR availableCDDcd15718FYVE_WDFY1_likecoord: 280..349
e-value: 9.31245E-44
score: 147.468
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 170..274
e-value: 2.1E-22
score: 79.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 8..169
e-value: 1.0E-19
score: 70.2
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 382..396
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 215..229
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 20..280
score: 25.286
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 14..274
coord: 369..398
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 282..353
score: 12.486
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 281..359

Blast
[Close]
BLAST of TCONS_00064594-protein vs. Swiss-Prot (Human)
Match: WDFY2 (WD repeat and FYVE domain-containing protein 2 OS=Homo sapiens GN=WDFY2 PE=1 SV=2)

HSP 1 Score: 420.624 bits (1080), Expect = 3.631e-146
Identity = 185/401 (46.13%), Postives = 275/401 (68.58%), Query Frame = 0 
Query:    1 MAAQLRTKKGKSKPTLLNRLELNGDIIFAAVFIPHEDSIITLGADKSIRVWVMRDNGKYWPSVFHHMPDVGHSLDFNKESGKVFVGMAQGTIHEYDLSDDVNTLTLARNYLAHTKRVNGTFFSLDYNWLLSCGNDKQFQWHCTKSGRRIGGYSAAKAPCTCLQFDSHSCYAFMGDRGGEIHVFKLSENSLKPVTILKGHSGGILSLTWDEERKLLFSGSADQSIIIWDIGGQKGSAVELHGHRGCVHNVSLTSNTKKLLSYGEDRMLVMWDMTVERKETPNWSQSDMCEKCASPFFWNFKQMWDQKIVGVRQHHCRKCGRAVCQKCSNKMSVLPKFGYEHEVRLCQECFLTIKEEDKVSTTGFYELKHGASHLQIDHSRGRMLTCGSDDVVMIWDVKEFLN 401
            MAA+++ K    KP LL R+E + +++  AV +P E+ +I++  D+++RVW+ RD+G+YWPSV+H MP     + FN E+ ++ +G+  GTI E+ LS+D N +T  +NY AH  RV    F L+  W+LS G DKQF WHC++SG+R+GGY  + A  + LQFD  + + F+GD  G++ + KL + +   VT  +GH+GG+ +L WD  +++LFSGS+D S+I+WDIGG+KG+A+EL GH   V  +S   +T++L+S G D  +V+W+M VER+ETP W  SD C+KC  PFFWNFKQMWD K +G+RQHHCRKCG+AVC KCS+K S +P  G+E EVR+C  C   I +E++  T  F++ KH   H+  D +RG +LT G+D V+ +WD+   ++
Sbjct:    1 MAAEIQPKPLTRKPILLQRMEGSQEVVNMAVIVPKEEGVISVSEDRTVRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKMTPVKNYQAHQSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTS-AVASGLQFDVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGSSDHSVIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWNMDVERQETPEWLDSDSCQKCDQPFFWNFKQMWDSKKIGLRQHHCRKCGKAVCGKCSSKRSSIPLMGFEFEVRVCDSCHEAITDEERAPTATFHDSKHNIVHVHFDATRGWLLTSGTDKVIKLWDMTPVVS 400
The following BLAST results are available for this feature:
BLAST of TCONS_00064594-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDFY23.631e-14646.13WD repeat and FYVE domain-containing protein 2 OS=... [more]
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