TCONS_00064593-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064593-protein
Unique NameTCONS_00064593-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length505

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064593-protein ID=TCONS_00064593-protein|Name=TCONS_00064593-protein|organism=Clytia hemisphaerica|type=polypeptide|length=505bp
YLHVTVRLILEMSFETTTTITTLNIKELNLSNVVLGAVVGAGGMLVAMKV
YTLVKKRKKKKSSPKHHLLTPTRQSVRTPQLPSLIRSPDPPNTIESGLER
NPSLDLLGQEFFNEEAIPPEEVSTPKTPTSTATSSEDVQTLLTLLYKIGE
AQSWRENTLHRGISCNICSANPLNGVRFKCLNCVDYDVCSRCEPSCDHDL
THVFVKIAIPIPPLANPRTTLLPVFYPGKKSITGSLKWEEAVALRERTHF
DTTHIEVLYEQYKSLCSSKDVGITKDTFLSCLGPLSTKKNLVVEQLFSFY
DADSDGFINFSDFVNGMSVLSKGTKAERMKYIFKGYDLDKDGFVSKDDLQ
QMLRAYHQLSMELVRDVVRSCEEEMMASYDDGGNRPISAVFNAPIPDSVS
MNRQSSAQSLSASKHSESLSAEPAALTPYDNSPSSVVLTNRKNTQYERFS
AVEAMTQDAIVELVDQIIQKADLDRDGKLSESEFYQYAVTDNSLLCWFEA
IDTVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040504XLOC_040504Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064593TCONS_00064593Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR000433Znf_ZZ
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 342..360
score: 17.0
coord: 296..317
score: 33.57
coord: 236..250
score: 37.95
coord: 320..339
score: 36.54
NoneNo IPR availableGENE3D1.10.238.10coord: 241..503
e-value: 4.8E-42
score: 142.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..99
NoneNo IPR availableCDDcd02340ZZ_NBR1_likecoord: 163..207
e-value: 2.09267E-12
score: 61.1218
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 153..217
IPR002048EF-hand domainSMARTSM00054efh_1coord: 463..491
e-value: 0.6
score: 19.1
coord: 328..356
e-value: 0.18
score: 20.9
coord: 292..320
e-value: 8.2E-4
score: 28.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 327..487
e-value: 7.4E-9
score: 35.9
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 295..313
e-value: 0.12
score: 11.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 288..323
score: 11.863
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 324..359
score: 13.37
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 459..494
score: 9.771
IPR002048EF-hand domainCDDcd00051EFhcoord: 293..354
e-value: 7.01094E-12
score: 60.2541
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 159..204
e-value: 1.5E-8
score: 44.4
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 160..195
e-value: 5.6E-11
score: 42.0
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 165..192
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 159..206
score: 12.826
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 301..313
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 337..349
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 472..484
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 456..502
coord: 233..370

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064593-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top