TCONS_00064569-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064569-protein
Unique NameTCONS_00064569-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1963

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064569-protein ID=TCONS_00064569-protein|Name=TCONS_00064569-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1963bp
LILFKNNFLGIEASIPPQTLIKGNISYFSFKLDGSISFDPDNKRSKLVGM
TFEWTCRSVCSQEQLEDALHHRKNHTDVIPKEYESEDSLICLSQEWKKIG
VNKPELDIHTAELLEGFKYDFKLVVTKGERVGRTTQRLNVLFGATPLVKI
TCANNCGLKINTMDRFILHSECENCDVDTKLDASWTVIDDEGNFLDDPKL
FSTGLKHRNLVVKKHQLKQNTTYNFTLTIGYLNQPEKATFVMTRRTSVTP
TPGNCSISPTEAPANARFRLWCEDWFNIDQPTFYEFRYQRTLNRPGNLPI
INPTSTSENEISNVLLPVGLKERDYRIDLVIMVRNKYGQFSEFNNGLSVK
VTPIQMNNSVSLSSIASSLIPQDANDVAAVTSAAQAIGDLFQMSRDDENN
KEQEYDDVTGMPKKEGRESNERKAKYNEERKEIKKQMMGLLSQVPLNNAM
ALGAVAGALRSMTNDAEDLNDESQERGIEMVSKLTSQFDNFQQDNDGEHN
SLGYDEVENSMNSVFGSVSNLFTNEVKNVELGSDSVLLMTTTTTTTTMSP
IQAAKARANNSINNIDRLVNTLDQGFTMLAGNKVEGESPTTGKMGSFEFG
VQKATPSEIANLTVAGSGEGAGGFALPQGSSMFNQSTMEDSLSVLNVNYD
NNIYLSDTAGAKNIKSKVASLSFKAGQNEVKVNNTESPIVIKLENKVSSM
KKTQISLPMPGFLKIHKVKLKSTDCQLLLSLHPEVASVHEGTRLVVYVQY
GKPPTTHDHDFALELRNKEPIKLIQNSTLNKAEERVSNVELMNDGTLFLW
SFEELKYGNFTNKTILYLAFRYEGLMPDLLKFDNPYTYDVLEMRGSMNYS
LITFCAECSYWSKEDSKWKSDGCQMNRHETSLHVTTCHCNHLTSFGSFFV
APNPLPTPSLALLKEGYVLFVTVGSVLFLYVIGMLIARRADKADQTKIGV
CPIPDNKPEHHYLYEITINTGSRLNAGTKSKVYINVIGDLGESGVRPLYD
NERSPFQRSSSDVFIMATESSLGDLRAIRVFHDNSGGGWYLRNVEIVDLV
IEKKSVFLASRWLAVELEDGRVDRVFRQSSQAQLKEFNYLFVNKAKRDLS
DAHLWFSIXFVNKAKRDLSDAHLWFSIYARPPRSSFSRCQRLSVAMSILF
THMLANLMFYGRQPAGSPATENKVGSFSINMQQIFIAVISACICIPVNIL
LVTLFRNIKPPSLQQPSPYIDDQDKNKTETKNNGHKYKMVSSYDDNGYGD
DDDVFRVSLITDNDDDDIAVENEKTPLKPNVENEDFEAEAKEEGCWLKKI
LKKKEKKKKEPTYLPEWVLYPAWVLNILVILGCGFMVVWYGMAFGNKKSL
EWLTSVTIGLVQDILLIQPLKVLVIAVFVALVVRKLDDEEKSEVEKQARL
LARDEEWLHPASSNADLTAIGVQCQACAPSDRELAYARDERIKEIKMKAI
TRELGFYVFFCFVVYVLGMSTRDTTAFHQTINMRETLQLHPRETSKAFSD
RTKYQFPKVTTQSQAWDYLEEVLLPNMFPDEFYQNISSRWDNKSDIKHFP
NKLTMSDLTSKVVTGTRLRQVRIKKDTCTKPHQVAPFITIDCAGPYNRAV
ENKGNYDGNWAKPIMEHDYEMDQLSMPWRWQDSKLLDAFPIIGNIDTYFG
NGYVTELFPRWNNKHFMEKLKEKLWLDRHTRALIVETVTYNPATNYFQNV
AIVFEFAPTGGVVHYNSVITFKLYRYTSKYSTMILFCEITFILCMLLFLV
REARRCYRNGAKQYFTQFWNLIELLIIIVSILAICFYFYRDKIAKDLFKR
LPSKAPQNFISFQFAAYWDQTYSGMVALISFFVTLKFIKLLRFNRRIAML
SSTLKRAWDPLSNFGIIFGIIITACVVFGNMVFGRELYDYQNYFRSTASI
IGLLLGKFSYHEFTSADRLLGPIFFFAFNFIVNWVVMNMFIAILNEIIME
VHANEDLQSNEXS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040493XLOC_040493Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064569TCONS_00064569Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000203GPS
IPR001024PLAT/LH2_dom
IPR002859PKD/REJ-like
IPR013122PKD1_2_channel
IPR023298ATPase_P-typ_TM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 551..571
NoneNo IPR availableCOILSCoilCoilcoord: 416..443
NoneNo IPR availableGENE3D3.40.1850.10coord: 28..156
e-value: 0.38
score: 10.6
NoneNo IPR availableGENE3D1.10.287.70coord: 1700..1953
e-value: 1.5E-13
score: 50.1
IPR000203GPS motifSMARTSM00303GPS_3coord: 854..903
e-value: 0.0084
score: 24.1
IPR000203GPS motifPFAMPF01825GPScoord: 857..896
e-value: 2.8E-8
score: 34.2
IPR000203GPS motifPROSITEPS50221GPScoord: 855..905
score: 13.185
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 962..1079
e-value: 4.0E-8
score: 43.0
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 961..1087
e-value: 3.0E-30
score: 104.4
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 964..1076
e-value: 1.5E-13
score: 51.2
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 962..1077
score: 35.095
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 961..1070
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 30..361
e-value: 1.1E-47
score: 162.8
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1505..1950
e-value: 3.3E-93
score: 312.6
IPR023298P-type ATPase, transmembrane domainSUPERFAMILY81665Calcium ATPase, transmembrane domain Mcoord: 1728..1892

Blast
BLAST of TCONS_00064569-protein vs. Swiss-Prot (Human)
Match: PKDRE (Polycystic kidney disease and receptor for egg jelly-related protein OS=Homo sapiens GN=PKDREJ PE=2 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 3.274e-71
Identity = 268/1138 (23.55%), Postives = 474/1138 (41.65%), Query Frame = 0
Query:  864 EDSKWKSDGC------QMNRHETSLHVTTCHCNHLTSFGSFFVAPNP--LPTPSLALLKEGYVLFVTVGSVLFLYVIGMLIARRADKADQTKIG-VCPIPDNKPEHHYLYEITINTGSRLNAGTKSKVYINVIGDLGESGVRPLYDNERSPFQRSSSDVFIMATESSLGDLRAIRVFHDNSG--GGWYLRNVEIVDLVIEKKSVFLASRWLAVELEDGRVDRVFRQSS-QAQLKEFNYLFVNKAKRDLSDAHLWFSIXFVNKAKRDLSDAHLWFSIYARPPRSSFSRCQRLSVAMSILFTHMLANLMFYG--RQPAGSPATENKVGSFSINMQQIFIAVISACICIPVNILLVTLF-----------RNIKPPSLQQPSPYIDDQDKNKTETKNNGHKYKMVSSYDDN-----GYGDDDDVFRVSLITDNDDDDIAVENEKTP--LKPNVEN----EDFEAEAKEEGCWLKKILKKKEKKKKEPTYLPEWVLYPAWVLNILVILGCGFMVVWYGMAFGNKKSLEWLTSVTIGLVQDILLIQPLKVLVIAVFVALVVRKLDDEEKSEVEKQARLLARDEEWLHPASSNADLTAIGVQCQACAPSDRELAYARDERIKEIKMKAITRE----------LGFYVFFCFVVYVLGMSTRDTTAFHQTINMRETLQLHPRETSKAFSDRTKYQFPKVTTQSQAWDYLEEVLLPNMFPDEFYQNISSRWDNKSDIKHFPNKLTMSDLTSKVVTGTRLRQVRIK--KDTCTKPHQVAPFIT------IDCAGPYNRAVENKGNYDGNWAKPIMEHDYEMDQLSMPWRWQDSKLLDAFPIIGNIDTYFGNGYVTELFP---RWNNKHFMEKLKEKLWLDRHTRALIVETVTYNPATNYFQNVAIVFEFAPTGGVVHYNSVITFKLYRYTSKYSTMILFCEITFILCMLLFLVREARRCYRNGAKQYFTQFWNLIELLIIIVSILAICFYFYRDKIAKDLFKRLPSKAPQNFISFQFAAYWDQTYSGMVALISFFVTLKFIKLLRFNRRIAMLSSTLKRAWDPLSNFGIIFGIIITACVVFGNMVFGRELYDYQNYFRSTASIIGLLLGKFSYHEFTSADRLLGPIFFFAFNFIVNWVVMNMFIAIL 1944
            E + W    C      +  R   ++ +T  H +         V PNP  L    +  L +  V   TV  ++ LYV     A   D+ DQ   G V  +PDN P  +  Y +TI TGSR  +GT++ V++ + G +  S V  L     +   R S + F++ T+S LGD+ +IRV+H+N G    WYL  +++ +L      +F+  +WL+V   D  +DR F  +    +L   ++ F++                       +L   H+WFSI+A     +F+R QRLS  +++L + +L N+MF+   RQ      TE++   +   M+ + I + S  I IPV +L+  LF           + + P    Q  P + +  ++  E     H Y+    +          G           T            KTP  L PN  +    ED +    E+    K +   ++ KKK    LP W +Y AW L         F +V+YG+ +G  KS+EWL +      Q +LL+QP K+++++ F            ++   K  + L+    W    S+    T I +      P + +  + +  RI+  +M     E                  F+ Y+L             + +R T   +    ++   DR       VT     + +L  VLLP +  D                    N   + + +SK++    +RQVR K  +  C    +   F+       I C   Y    E+  NY G W + + +   +       ++ Q ++ L  +   G + TY   GY    FP   R+N+   +++L+E  WLD  T A+++E  T+NP  N F +++++FE +  G V    S+ +F L  +  K S  I +  +  ++  L ++V E     +  A  Y    +NL+   +  +  + I  +  +  +A  + +   S  P++FI F   +  D     ++  + F   LK ++  RF   + +    ++ A   + +   +  +     + FG +VFG+  ++Y N   ST ++    +  F   EF S +R+LG +F  +F  ++  V++N+F A++
Sbjct: 1123 EKTSWYEVHCICKNVVRARRQLGTIGLTGIHLHTHYVMAKVIVIPNPVDLRLNIIKSLHQNPVTLFTVLFIILLYVGLAFWALYRDEMDQHLRGHVIVLPDNDPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGTVSTSDVHCLSHPHFTTLYRGSINTFLLTTKSDLGDIHSIRVWHNNEGRSPSWYLSRIKVENLFSRHIWLFICQKWLSV---DTTLDRTFHVTHPDERLTRKDFFFID--------------------VSSNLRKNHMWFSIFASVVAKTFNRLQRLSCCLAMLLSSLLCNIMFFNLNRQEQ----TESRERKY---MRSMMIGIESVLITIPVQLLITFLFTCSQRKPQADLKEVSP----QKHPLMSEASEHWEEYLRKWHAYETAKVHPREVAKPASKGKPRLPKASPKATSKPKHRHRKAQIKTPETLGPNTNSNNNIEDDQDVHSEQHPSQKDL---QQLKKKPRIVLPWWCVYVAWFLVFATSSISSFFIVFYGLTYGYDKSIEWLFASFCSFCQSVLLVQPSKIILLSGF------------RTNKPKYCKNLS----W----STKYKYTEIRLDGMRMHPEEMQRIHDQIVRIRGTRMYQPLTEDEIRIFKRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFY---YNQFIRDRFSMDLATVTKLEDIYRWLNSVLLPLLHNDL-------------------NPTFLPESSSKILGLPLMRQVRAKSSEKMCLPAEK---FVQNSIRREIHCHPKYGIDPEDTKNYSGFWNE-VDKQAIDESTNGFTYKPQGTQWL--YYSYGLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNWLDEKTWAVVLELTTFNPDINLFCSISVIFEVSQLGVVNTSISLHSFSLADFDRKASAEI-YLYVAILIFFLAYVVDEGCIIMQERAS-YVRSVYNLLNFALKCIFTVLIVLFLRKHFLATGIIRFYLSN-PEDFIPFHAVSQVDHIMRIILGFLLFLTILKTLRYSRFFYDVRLAQRAIQAALPGICHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHSTQTVFSYCVSAFQNTEF-SNNRILGVLFLSSFMLVMICVLINLFQAVI 2171          
The following BLAST results are available for this feature:
BLAST of TCONS_00064569-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKDRE3.274e-7123.55Polycystic kidney disease and receptor for egg jel... [more]
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