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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00064454-protein ID=TCONS_00064454-protein|Name=TCONS_00064454-protein|organism=Clytia hemisphaerica|type=polypeptide|length=318bp
MMKTKGLSHHSHSRFTPLYHPYYQTPVYNNMKTCSAGYMDTTPMPFNNFS
ASTSFYESESEESFPGSPFSNTGEQSFEGDLSTIDFSDLLNIQKHEQDDQ
NQTNQLQQILEQVSREALQPLDPVDISYSYNLSTTHTPPCFRAVSHDSYP
SPNYQPREEQPYPSPTYNHREEPFPSPNFHQMQPPVPSPPSPPRNIKTFE
IKVESGKPDPPQKRRSSSEDSNDKIRLYEFVLQLLNEERADCIRWLCPIE
GEFEITNSAKIAQLWGEVKKNPTMTYEKFARALRHYYKLGILINYKHKEK
LRYKFSQDILQKNKRTDA Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 92..112 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 57..78 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 143..196 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 202..221 |
| IPR000418 | Ets domain | PRINTS | PR00454 | ETSDOMAIN | coord: 249..267
score: 33.89
coord: 268..286
score: 52.84
coord: 225..238
score: 41.54 |
| IPR000418 | Ets domain | SMART | SM00413 | etsneu2 | coord: 224..310
e-value: 1.9E-30
score: 117.1 |
| IPR000418 | Ets domain | PFAM | PF00178 | Ets | coord: 226..305
e-value: 7.0E-23
score: 80.8 |
| IPR000418 | Ets domain | PROSITE | PS50061 | ETS_DOMAIN_3 | coord: 225..306
score: 19.466 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | GENE3D | 1.10.10.10 | | coord: 210..317
e-value: 2.9E-25
score: 88.0 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | SUPERFAMILY | 46785 | "Winged helix" DNA-binding domain | coord: 214..308 |
Blast
The following BLAST results are available for this feature:
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