TCONS_00064199-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064199-protein
Unique Name	TCONS_00064199-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1100

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064199-protein ID=TCONS_00064199-protein|Name=TCONS_00064199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1100bp
MPPTDVLISEYQKYANALTDSSVADDDKLKYAQEISQNFEAISSSTHYST
FLEFAIPKFLSVLKDGEPQFTTDSVKQELRKLLLETIHRIPANDSLKTHV
SSILDVMFNILTIDNEENVLVCLRIIIELHKQYRPPIKPEIKMFLQFVIN
FYKEFPNTAKTHFDIVTVTPTGHLPPDTSATSTTGSVPLAGTSAMKVPQI
GSPVSQLNEATTPGRTSQQQTTQIAKATQSLKVLAELPIIVVLMYQLYKQ
NVQGKIGEFIPVVMNTITLQPSLGCRKLTTFNKEIYVDFTAAQIKTLSFL
AYIVRIFQDLVSQYSNNMVAGMLALFRYCPQEVAHLRKELLIAARHILAT
DLRSKFVPYIEQLFDEDVLIGNGWTVNEALRPLAYSTLADFVHHVRSLLT
LPNLSIAVQLFSKNVYDESLPISIQRMSCKLLLNLVECIRQRSDEAAGRE
ILMKMLEVFVRKFQTIAKHHIPMIMEKCELSSDPAPDKKTQTTTTKGDQS
TTNSTTTAPGGGKDTKNEEDPNDPVVDPKKSIGSNRDAKESFTVADYREM
VKTLVCGVKTITWGAGSCKLPGDIQIPVYPQGNKVFLPSETETFIRLLKY
ALVALDVYQISMNPSGVGYVRMTNSPHQIRMKEEKEILEHFAGVFTMLNT
ATFKEVFSATIEYLVERIHNNYAFQIIPNAFLANPNTSATFATILVNFLL
GRLKDMGTKSERANLYLKLFKLVFGSVSLFAQENEQMLKPHLHDIVNNSM
ELALTAKEPYNYFLLLRALFRSIGGGNHDLLYQEFLPLLPTLLQGLNNLQ
SGIHKQYMKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQSLVSQ
GLRTLELCVDNLQPDFLYDHIQPVKSDLMQALWKTLRNPMETMAHVAFRV
LGKFGGGGRKMLQEPQQLTYRATENIGACLMLHFMDCNKPVNLPISVIIE
KAVSVLKTQVPTLPLSSQQNNYSVENMPFYREQAWTIAKHFLVGALSLED
NEVFFKKLVRDQSYKENEVTKNGKACVPPCVDEQSKKNFQQGLTSMLFAA
TIKELQNDSIPFMLGVLRQIALLIVTQQAGKFSKPPQTRYRTIIQIIIYQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040252	XLOC_040252	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064199	TCONS_00064199	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 29..1073 e-value: 2.2E-39 score: 134.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..534
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 654..906 coord: 287..444 coord: 34..154

Blast

[Close]

BLAST of TCONS_00064199-protein vs. Swiss-Prot (Human)
Match: TRRAP (Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3)

HSP 1 Score: 1166.76 bits (3017), Expect = 0.000e+0
Identity = 598/1090 (54.86%), Postives = 750/1090 (68.81%), Query Frame = 0

Query:    7 LISEYQKYANALTDSSVADDDKLKYAQEISQNFEAISSSTHYSTFLEFAIPKFLSVLKDGEPQFTTDSVKQELRKLLLETIHRIPANDSLKTHVSSILDVMFNILTIDNEENVLVCLRIIIELHKQYRPPIKPEIKMFLQFVINFYKEFPNTAKTHFDIVTVTPTGHLPPDTSATSTTGSVPLAGTSAMKVPQIGSPVSQLNEATTPGRTSQQQTTQ--IAKATQSLKVLAELPIIVVLMYQLYKQNVQGKIGEFIPVVMNTITLQPSLGCRKLTTFNKEIYVDFTAAQIKTLSFLAYIVRIFQDLVSQYSNNMVAGMLALFRYCPQEVAHLRKELLIAARHILATDLRSKFVPYIEQLFDEDVLIGNGWTVNEALRPLAYSTLADFVHHVRSLLTLPNLSIAVQLFSKNVYDESLPISIQRMSCKLLLNLVECIRQRSDEAAG--REILMKMLEVFVRKFQTIAKHHIPMIMEKCELSSD------PAPDKKTQTTTTKGDQSTTNSTTTAPGGGKDTKNEEDPNDPVVDPKKSIGSNRDAKESFTVADYREMVKTLVCGVKTITWGAGSCKLPGDIQ-IPVYPQGNKVFLPSETETFIRLLKYALVALDVYQISMNPSGVGYVRMTNSPHQIRMKEEKEILEHFAGVFTMLNTATFKEVFSATIEYLVERIHNNYAFQIIPNAFLANPNTSATFATILVNFLLGRLKDMGTKSERANLYLKLFKLVFGSVSLFAQENEQMLKPHLHDIVNNSMELALTAKEPYNYFLLLRALFRSIGGGNHDLLYQEFLPLLPTLLQGLNNLQSGIHKQYMKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQSLVSQGLRTLELCVDNLQPDFLYDHIQPVKSDLMQALWKTLRNPMETMAHVAFRVLGKFGGGGRKMLQEPQQLTYRATENIGACLMLHFMDCNKPVNLPISVIIEKAVSVLKTQVPTLPLSSQQNNYSVENMPFYREQAWTIAKHFLVGALSLEDNEVFFKKLVRDQSYKENEVTKNGKACVPPCVDEQSKKNFQQGLTSMLFAATIKELQNDSIPFMLGVLRQIALLIVTQQAGKFSKP 1085
            L+ +Y ++  ALTD +  D+ KLK  QE+S+NFE ++SS  YSTFLE  IP+FL+ L+DGE QF  +   Q+LRKL+LE IHRIP N+ L+ H  ++L VMF  L  +NEENVL+CLRIIIELHKQ+RPPI  EI  FL FV   YKE P     +F+   V P   +PP                     P++   ++ +     P R   +  T   I + + SLKVLAELPIIVVLMYQLYK N+   + EF+P++MNTI +Q S   R+   +NKE+Y DF AAQIKTLSFLAYI+RI+Q+LV++YS  MV GML L   CP E AHLRKELLIAA+HIL T+LR++F+P +++LFDE +LIG+G+T  E LRPLAYSTLAD VHHVR  L L +LS+AVQLF+KN+ DESLP SIQ MSCKLLLNLV+CIR +S++ +G  R++LM+MLEVFV KF TIA++ +  I +KC+  S+        P   T         S        P              PV   +K    +++ K++F V D R +VKTLVCGVKTITWG  SCK PG+ Q IP     NK   P ET+ +I+L+KYA+ ALD+YQ+ +  +G  Y+R+ N    +RMKEEKE+LEHFAGVFTM+N  TFKE+F  T+ Y+VERI  NYA QI+ N+FLANP TSA FATILV +LL RL +MG+  E +NLYLKLFKLVFGSVSLFA ENEQMLKPHLH IVN+SMELA TAKEPYNYFLLLRALFRSIGGG+HDLLYQEFLPLLP LLQGLN LQSG+HKQ+MKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQ+LVSQGLRTLELCVDNLQPDFLYDHIQPV+++LMQALW+TLRNP ++++HVA+RVLGKFGG  RKML+E Q+L Y  TE  G  + + F DC   + LP+   IE A+  LK               S    P+YR QAW + K FLV  +SLEDN+    +L+   ++ E  +     +      D  ++K F+Q LT    +A IK+L+  ++PF+  ++R   ++ V QQ G F  P
Sbjct:   17 LMKKYLQFVAALTDVNTPDETKLKMMQEVSENFENVTSSPQYSTFLEHIIPRFLTFLQDGEVQFLQEKPAQQLRKLVLEIIHRIPTNEHLRPHTKNVLSVMFRFLETENEENVLICLRIIIELHKQFRPPITQEIHHFLDFVKQIYKELPKVVNRYFENPQVIPENTVPP---------------------PEMVGMITTIAVKVNPEREDSETRTHSIIPRGSLSLKVLAELPIIVVLMYQLYKLNIHNVVAEFVPLIMNTIAIQVSAQARQHKLYNKELYADFIAAQIKTLSFLAYIIRIYQELVTKYSQQMVKGMLQLLSNCPAETAHLRKELLIAAKHILTTELRNQFIPCMDKLFDESILIGSGYTARETLRPLAYSTLADLVHHVRQHLPLSDLSLAVQLFAKNIDDESLPSSIQTMSCKLLLNLVDCIRSKSEQESGNGRDVLMRMLEVFVLKFHTIARYQLSAIFKKCKPQSELGAVEAALPGVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVKTLVCGVKTITWGITSCKAPGEAQFIP-----NKQLQPKETQIYIKLVKYAMQALDIYQVQIAGNGQTYIRVANC-QTVRMKEEKEVLEHFAGVFTMMNPLTFKEIFQTTVPYMVERISKNYALQIVANSFLANPTTSALFATILVEYLLDRLPEMGSNVELSNLYLKLFKLVFGSVSLFAAENEQMLKPHLHKIVNSSMELAQTAKEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLLPNLLQGLNMLQSGLHKQHMKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQTLVSQGLRTLELCVDNLQPDFLYDHIQPVRAELMQALWRTLRNPADSISHVAYRVLGKFGGSNRKMLKESQKLHYVVTEVQGPSITVEFSDCKASLQLPMEKAIETALDCLK---------------SANTEPYYRRQAWEVIKCFLVAMMSLEDNKHALYQLLAHPNFTEKTIPNVIISHRYKAQDTPARKTFEQALTGAFMSAVIKDLRPSALPFVASLIRHYTMVAVAQQCGPFLLP 1064

The following BLAST results are available for this feature:

BLAST of TCONS_00064199-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TRRAP	0.000e+0	54.86	Transformation/transcription domain-associated pro...	[more]

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TCONS_00064199-protein (polypeptide) - C. hemisphaerica