TCONS_00064178-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064178-protein
Unique NameTCONS_00064178-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length527

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064178-protein ID=TCONS_00064178-protein|Name=TCONS_00064178-protein|organism=Clytia hemisphaerica|type=polypeptide|length=527bp
MVKTTITATGYGVLAHDGPSTNQRPDFTHSYGSLDNNFAHNSTSTTDSCH
RWFVEGLDNDYEIESAYTAHGTPRQSNLGNYQDFYNDDSYITDNPDSSLL
DPHYVDNLSGENQHLIDSYTTNGLASTPLVAWNLTNLLLSTSLLAFPFIV
RQAGYIVLPIAFLIAMMLNYTSRILIDLMYENLPEYDNQRVRVRKHITEI
GREVFNSEKGAKVVHVVQIIEMLCICILNICVLGQLGHEISNYNVQLCTA
IAALFAFPTFFIRKLAIIGWLQTIGVISLAIGIMLIQGWCLVHAEKFKTD
NIPIVQWHKLPIAIGVVVYAYGIQGVLPGMEEQMRKPQQFGRVINWTFGV
SFILQCVFSLTNAMYYGEETAQVIVIDMKDHFELGITSACFIGISILSHF
SLPTLVVMESLDNAIVKTSSCCPTRQQTLHTFLMVLLRIGIIALCLGLAL
VLPYFAYLMGFIGSSITLTMCLIIPCTFHLKMRYDTLRLHQICLDVVIIV
SSLVCLGAGSYFSFESIYYDWVNGSYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040242XLOC_040242Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064178TCONS_00064178Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 129..514
e-value: 7.1E-35
score: 120.4

Blast
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BLAST of TCONS_00064178-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 1.000e-39
Identity = 109/402 (27.11%), Postives = 196/402 (48.76%), Query Frame = 0 
Query:  131 AWNLTNLLLSTSLLAFPFIVRQAGYIVLPIAFLIAMMLNYTSRILIDLMYENLPEYDNQRVRVRKHITEIGREVFNSE---KGAKVVHVVQIIEMLCICILNICVLGQL------GHEISNYNVQLCTAIAALFAFPTFFIRKLAIIGWLQTIGVISLAIGIMLIQGWCLVHAEKFKTDNIPI-VQWHKLPIAIGVVVYAYGIQGVLPGMEEQMRKPQQFGRVINWTFGVSFILQCVFSLTNAMYYGEETAQVIVIDMKDHFELGITSACFIGISILSHFSLPTLVVMESLDNAIVKTSS-----CCPTRQQTLHTFLMVLLRIGIIALCLGLALVLPYFAYLMGFIGSSITLTMCLIIPCTFHLKMRYDTLRLHQICLDVVIIVSSLVCLGAGSYFSFESI 517
             WN+TN +    +L  P+ +   GY+ L +    A++  YT +ILI  +YE     D + VRVR     I            G +VV+V QIIE++  CIL + V G L      G  +S  +  +   IA     P  F++ L  +     +  ++  +  +L+  +CL  A  +  + +   +   K PI+IG++V++Y  Q  LP +E  M++P +F  ++NWT   + +L+ +F+L   + + +ET +VI  ++       + +   +  ++LS + LP    +E L+ ++ +  S      C +    L ++ + L R  ++   L +A+ +P+FA LMG  GS     +C ++P  FHL++ +  L  HQ+  DV I V   +C  +G   S E +
Sbjct:  122 GWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEE--NEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPVSQKSWSI---IATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLPGSIR-AVVNIFLVAKALLS-YPLPFFAAVEVLEKSLFQEGSRAFFPACYSGDGRLKSWGLTL-RCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGL 515
The following BLAST results are available for this feature:
BLAST of TCONS_00064178-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT1.000e-3927.11Vesicular inhibitory amino acid transporter OS=Hom... [more]
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