TCONS_00064175-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064175-protein
Unique NameTCONS_00064175-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length610

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064175-protein ID=TCONS_00064175-protein|Name=TCONS_00064175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MPGNDAASECNIKVVCRIRPQSEAEKKTGGSIVVKFPSNDTVIHSGRAYT
FDRVFQPSSTQELVYTEAAKPIVSDVLAGYNGTIFAYGQTASGKTHTMEG
VIGDDSWQGIIPRIIQDIFNYIYTMDENLEFHIKVSYYEIYLDKIRDLLD
VSKTNLVVHEDRNRVPYVKGATERFVSSPEEVLDVITEGKANRHVSVTNM
NEHSSRSHSIFLINVKQENTETQKKLSGKLYLVDLAGSEKVSKTGAEGDT
LEEAKNINKSLSALGNVISALAEGSNTYIPYRDSKMTRILQESLGGNSRT
TIVICCSPSSFNDVETKSTLMFGSRAKTIKNTVIVNEELTADEWKKRYEK
EKEKNAKMKVMLKHLEQELARWRKGEDVPTNEQINTADKGRTAELLLEQS
QIERNNEANAANVSKISDAERQNFEEERSKLYKQIDERDEEIQAQAASID
NLRQQFTELEETLIFTKANAESLEGQVGSIAKDQEASKNEVKEVLQALEE
LALNYDQKLQEVDQKTKDNETLMEDLNTEQKSRQTLGHELEILQERMHVM
TKKVTEITNTLLGELSLIGDLIGGSVSGMKRPEIENASQFDEEFTVARLY
VSKLXRITVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040239XLOC_040239Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064175TCONS_00064175Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR019821Kinesin_motor_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 421..469
NoneNo IPR availableCOILSCoilCoilcoord: 334..368
NoneNo IPR availableCOILSCoilCoilcoord: 481..525
NoneNo IPR availableGENE3D1.20.5.340coord: 441..562
e-value: 4.8E-5
score: 22.6
NoneNo IPR availableCDDcd01369KISc_KHC_KIF5coord: 9..329
e-value: 0.0
score: 594.693
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 229..247
score: 63.2
coord: 79..100
score: 73.98
coord: 198..215
score: 61.39
coord: 279..300
score: 64.66
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 9..337
e-value: 1.2E-169
score: 579.6
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 3..343
e-value: 1.7E-133
score: 444.1
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 17..329
e-value: 6.4E-109
score: 363.8
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 11..329
score: 130.163
IPR019821Kinesin motor domain, conserved sitePROSITEPS00411KINESIN_MOTOR_1coord: 228..239
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..369

Blast
[Close]
BLAST of TCONS_00064175-protein vs. Swiss-Prot (Human)
Match: KINH (Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1)

HSP 1 Score: 721.85 bits (1862), Expect = 0.000e+0
Identity = 372/598 (62.21%), Postives = 460/598 (76.92%), Query Frame = 0 
Query:    8 SECNIKVVCRIRPQSEAEKKTGGSIVVKFPSNDTVIHSGRAYTFDRVFQPSSTQELVYTEAAKPIVSDVLAGYNGTIFAYGQTASGKTHTMEGVIGDDSWQGIIPRIIQDIFNYIYTMDENLEFHIKVSYYEIYLDKIRDLLDVSKTNLVVHEDRNRVPYVKGATERFVSSPEEVLDVITEGKANRHVSVTNMNEHSSRSHSIFLINVKQENTETQKKLSGKLYLVDLAGSEKVSKTGAEGDTLEEAKNINKSLSALGNVISALAEGSNTYIPYRDSKMTRILQESLGGNSRTTIVICCSPSSFNDVETKSTLMFGSRAKTIKNTVIVNEELTADEWKKRYEKEKEKNAKMKVMLKHLEQELARWRKGEDVPTNEQINTADKGRTAELLLEQSQIERNNEANAANV-SKISDAERQNFEEERSKLYKQIDERDEEIQAQAASIDNLRQQFTELEETLIFTKANAESLEGQVGSIAKDQEASKNEVKEVLQALEELALNYDQKLQEVDQKTKDNETLMEDLNTEQKSRQTLGHELEILQERMHVMTKKVTEITNTLLGELSLIGDLIGGSVSGMKRPEIENASQFDEEFTVARLYVSKL 604
            +ECNIKV+CR RP +E+E   G   + KF   DTV+ + + Y FDRVFQ S++QE VY + AK IV DVL GYNGTIFAYGQT+SGKTHTMEG + D    GIIPRI+QDIFNYIY+MDENLEFHIKVSY+EIYLDKIRDLLDVSKTNL VHED+NRVPYVKG TERFV SP+EV+D I EGK+NRHV+VTNMNEHSSRSHSIFLINVKQENT+T++KLSGKLYLVDLAGSEKVSKTGAEG  L+EAKNINKSLSALGNVISALAEGS TY+PYRDSKMTRILQ+SLGGN RTTIVICCSPSS+N+ ETKSTL+FG RAKTIKNTV VN ELTA++WKK+YEKEKEKN  ++  ++ LE EL RWR GE VP +EQ +       A  + +   +  +  A A  V    +DAER+  EEE +KLYKQ+D++DEEI  Q+  ++ L+ Q  + EE L  T+ + ++++ ++  +  + +ASK EVKEVLQALEELA+NYDQK QEV+ KTK+ E L ++LN +  +  ++  EL+ L+E  +   K+  E+  +LL +L+ IG  +G   + +K+P  E     DEEFTVARLY+SK+
Sbjct:    5 AECNIKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGS-TYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKKKYEKEKEKNKILRNTIQWLENELNRWRNGETVPIDEQFDKEKANLEAFTVDKDITLTNDKPATAIGVIGNFTDAERRKCEEEIAKLYKQLDDKDEEINQQSQLVEKLKTQMLDQEELLASTRRDQDNMQAELNRLQAENDASKEEVKEVLQALEELAVNYDQKSQEVEDKTKEYELLSDELNQKSATLASIDAELQKLKEMTNHQKKRAAEMMASLLKDLAEIGIAVGN--NDVKQP--EGTGMIDEEFTVARLYISKM 597
The following BLAST results are available for this feature:
BLAST of TCONS_00064175-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KINH0.000e+062.21Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=... [more]
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