TCONS_00063937-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063937-protein
Unique NameTCONS_00063937-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length336

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063937-protein ID=TCONS_00063937-protein|Name=TCONS_00063937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MHSLHFFIFAVVFSNTCGFQPPEFEKCDVEDDKHWFCKKGLQYFDNFCDQ
DESKTACKQTCNLCNGPPTPPPVPEPICGVSKVSQSRVVNGEDAPEGAYP
WIASLQIRVAIENVKSHFCGGTLIHPKWVLTAAHCFDFGNFSMNAIMPFV
HVELGIHDQDKEESTSQLRNIKNAFESPDLGVKDGTLYGDLLLLELDVPV
MLNDRVNLPCLPDKEEYPTIGQSCVVAGWGIREYPSEKTGGILQQTRLPV
VGPNHIGCHSNTEVICVGHGFGTQANGKQHPNACKGDSGGPLVCQQPNGS
WKFVGVASYVHTYCKYYTAYAPVGKYLPWIKEHVPL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040074XLOC_040074Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063937TCONS_00063937Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 186..200
score: 32.3
coord: 120..135
score: 64.42
coord: 281..293
score: 64.39
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 87..330
e-value: 1.1E-54
score: 197.7
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 88..330
e-value: 7.8E-44
score: 150.0
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 88..335
score: 28.073
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 88..333
e-value: 6.72766E-53
score: 175.157
NoneNo IPR availableGENE3D2.40.10.10coord: 123..195
e-value: 4.0E-19
score: 67.9
NoneNo IPR availableGENE3D2.40.10.10coord: 88..122
e-value: 1.4E-20
score: 72.6
NoneNo IPR availableGENE3D2.40.10.10coord: 196..335
e-value: 5.2E-29
score: 100.7
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 282..293
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 130..135
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 61..334

Blast
[Close]
BLAST of TCONS_00063937-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.200e-40
Identity = 90/253 (35.57%), Postives = 129/253 (50.99%), Query Frame = 0 
Query:   86 SRVVNGEDAPEGAYPWIASLQIRVAIENVKSHFCGGTLIHPKWVLTAAHCFDFGNFSMNAIMPFVHVELGIHDQDKEESTSQLRNIKNAFESPDLGVKDGTLYGDLLLLELDVPVMLNDRVNLPCLPDKEEYPTIGQSCVVAGWGIREYPSEKTGGILQQTRLPVVG----PNHIGCHSNTEVICVGHGFGTQANGKQHPNACKGDSGGPLVCQQPNGSWKFVGVASYVHTYCKYYT--AYAPVGKYLPWIKE 332
            SR+VNGEDA  G++PW  SLQ +        HFCGG+LI   WV+TAAHC   G  + + ++       G  DQ  +E   Q+  I   F++P   +   T+  D+ LL+L  P   +  V+  CLP  ++    G  C   GWG  +Y + KT   LQQ  LP++         G      +IC G      A+G    ++C GDSGGPLVCQ+ +G+W  VG+ S+    C   T   YA V K +PW+++
Sbjct:   32 SRIVNGEDAVPGSWPWQVSLQDKTGF-----HFCGGSLISEDWVVTAAHC---GVRTSDVVVA------GEFDQGSDEENIQVLKIAKVFKNPKFSIL--TVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMICAG------ASG---VSSCMGDSGGPLVCQK-DGAWTLVGIVSWGSRTCSTTTPAVYARVAKLIPWVQK 258
The following BLAST results are available for this feature:
BLAST of TCONS_00063937-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB27.200e-4035.57Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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