TCONS_00063868-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063868-protein
Unique NameTCONS_00063868-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length607

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063868-protein ID=TCONS_00063868-protein|Name=TCONS_00063868-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MMFLSRTKTAVSRISRVVKHARAISGSVINNQITTHYTIKSRENDERWAD
VDMDRFADETDVLIVGGGPAGMTTAIKLKQLAAEQDIDLKVTVVEKASEI
GGHTLSGACIETKALDELFSDWKERDAPLHTEVTGDKMYYLTESKGINIP
VFKGLPMYNHGNYLVRLGNFVQWLGEQAEQMDVEIYPGIAASEVLYHEDG
SVKGIATADVGIARDGSPKDTFERGMELHAKVTVFAEGCHGHLAKQIFNK
FNLRENSCQQTYGIGIKELWEIDPDKHQPGLVIHTAGWPLPSDTYGGSFL
YHLDEGPLVSAGFVVGLDYKNPYLSPFQEFQRWKTHPSIRETFEGGTRIA
YGARALNEGGYQSLPKLTFPGGCVIGCSAGFMNVPKIKGTHGAMKSGLLA
AESIFEALSDEVNQEKESGIEPSTYGQRFKDSWLHKELYSARNIRPSFET
PLHLWGTMLYTGLFYWLGGGREPWTFKHDGIDAEKLKPAAECTPIEYPKP
DGKITFDLLSSVALSGTNHDHDQPAHLTLKNDDVPVERNLGVFDGPEARF
CPAGVYEYIDDEATGGRKLQINAQNCVHCKTCDIKCPSQNINWVVPESGG
GPAYSGM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040044XLOC_040044Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063868TCONS_00063868Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR0179004Fe4S_Fe_S_CS
IPR0178964Fe4S_Fe-S-bd
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00411PNDRDTASEIcoord: 61..83
score: 37.17
coord: 100..115
score: 39.22
NoneNo IPR availableGENE3D3.30.70.20coord: 545..591
e-value: 1.0E-4
score: 21.4
NoneNo IPR availablePFAMPF05187ETF_QOcoord: 502..605
e-value: 8.5E-47
score: 157.5
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 64..107
e-value: 3.4E-7
score: 30.3
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 261..358
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 506..605
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 44..441
e-value: 4.7E-55
score: 186.3
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 31..260
coord: 358..504
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 576..587
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 567..596
score: 8.735

Blast
[Close]
BLAST of TCONS_00063868-protein vs. Swiss-Prot (Human)
Match: ETFD (Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2)

HSP 1 Score: 839.721 bits (2168), Expect = 0.000e+0
Identity = 395/577 (68.46%), Postives = 468/577 (81.11%), Query Frame = 0 
Query:   32 QITTHYTIKSRENDERWADVDMDRFADETDVLIVGGGPAGMTTAIKLKQLAAEQDIDLKVTVVEKASEIGGHTLSGACIETKALDELFSDWKERDAPLHTEVTGDKMYYLTESKGINIPVFKGLPMYNHGNYLVRLGNFVQWLGEQAEQMDVEIYPGIAASEVLYHEDGSVKGIATADVGIARDGSPKDTFERGMELHAKVTVFAEGCHGHLAKQIFNKFNLRENSCQQTYGIGIKELWEIDPDKHQPGLVIHTAGWPLPSDTYGGSFLYHLDEG-PLVSAGFVVGLDYKNPYLSPFQEFQRWKTHPSIRETFEGGTRIAYGARALNEGGYQSLPKLTFPGGCVIGCSAGFMNVPKIKGTHGAMKSGLLAAESIFEALSDEVNQEKESGIEPSTYGQRFKDSWLHKELYSARNIRPSFETPLHLWGTMLYTGLFYWLGGGREPWTFKHDGIDAEKLKPAAECTPIEYPKPDGKITFDLLSSVALSGTNHDHDQPAHLTLKNDDVPVERNLGVFDGPEARFCPAGVYEYIDDEATGGRKLQINAQNCVHCKTCDIKCPSQNINWVVPESGGGPAYSGM 607
            +ITTHYTI  R+ D+RW  V+M+RFA+E DV+IVG GPAG++ A++LKQLA   + D++V +VEKA++IG HTLSGAC++  A  ELF DWKE+ APL+T VT D+   LTE   I +P+  GLPM NHGNY+VRLG+ V W+GEQAE + VE+YPG AA+EVL+H+DGSVKGIAT DVGI +DG+PK TFERG+ELHAKVT+FAEGCHGHLAKQ++ KF+LR N   QTYGIG+KELW ID    +PG V HT GWPL   TYGGSFLYHL+EG PLV+ G VVGLDY+NPYLSPF+EFQRWK HPSIR T EGG RIAYGARALNEGG+QS+PKLTFPGG +IGCS GFMNVPKIKGTH AMKSG+LAAESIF  L+ E  Q K  G+  + Y    K+SW+ KELYS RNIRPS    L ++G M+YTG+FYW+  G EPWT KH G D E+LKPA +CTPIEYPKPDG+I+FDLLSSVALSGTNH+HDQPAHLTL++D +PV RNL ++DGPE RFCPAGVYE++  E   G +LQINAQNCVHCKTCDIK PSQNINWVVPE GGGPAY+GM
Sbjct:   41 RITTHYTIYPRDKDKRWEGVNMERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
The following BLAST results are available for this feature:
BLAST of TCONS_00063868-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ETFD0.000e+068.46Electron transfer flavoprotein-ubiquinone oxidored... [more]
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