TCONS_00063698-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063698-protein
Unique NameTCONS_00063698-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length437

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063698-protein ID=TCONS_00063698-protein|Name=TCONS_00063698-protein|organism=Clytia hemisphaerica|type=polypeptide|length=437bp
MLIQRDGRKLSSTSQRNTFFHNLCTSALEEGYHQAFCEIFNLVGEARKNF
ASEENRRKDAIPLEEDRVKATHLKEILIHIEKWKRQGRVDKMYDEQLALA
TYFDEHQDFFLADHFYLCAYNTSKQIRSDGGKKEAEANQNLGKVSERKKE
YKNAIELYEKFYRLSKDKPWNTSDGILLSNVGCRYLLSAHVSFAEQLYPY
SEMRKDVLDHLHTAHQLAKEGSITEEVGRIGYLIGNKYDFYGDQQSALQY
HTEYYNFCKQTGDDIGLGKACQALAVANKRQGNYDQAIENLKQLLKVTSS
SSDIEIRQQACSDIGIVYNLMGKYEQAANYFRQSYELSLNKLPQSKLKHS
SCEYGISLAHGLLTGESESISFNNKKSIESLLFWKSERLQNFSSDHVTFT
MFETLKNRQEEEQKLKERRKSRSLERNELQNDWLKEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039924XLOC_039924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063698TCONS_00063698Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 407..432
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
NoneNo IPR availableGENE3D1.10.150.200coord: 265..313
e-value: 1.9E-8
score: 33.6
NoneNo IPR availablePFAMPF13424TPR_12coord: 274..337
e-value: 1.5E-8
score: 34.7
NoneNo IPR availableGENE3D3.30.70.100coord: 314..359
e-value: 3.0E-4
score: 20.5
coord: 188..264
e-value: 4.4E-4
score: 20.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..437
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 135..168
e-value: 11.0
score: 14.5
coord: 268..301
e-value: 0.25
score: 20.4
coord: 308..341
e-value: 9.9
score: 15.0
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 135..167
e-value: 0.0052
score: 16.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 308..341
score: 9.175
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 268..301
score: 7.198
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 135..168
score: 9.086
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 63..187
e-value: 6.8E-5
score: 22.7
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 84..198
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 210..343
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 135..168
score: 9.631
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 268..341
score: 12.225

Blast
[Close]
BLAST of TCONS_00063698-protein vs. Swiss-Prot (Human)
Match: TTC29 (Tetratricopeptide repeat protein 29 OS=Homo sapiens GN=TTC29 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.929e-42
Identity = 108/387 (27.91%), Postives = 193/387 (49.87%), Query Frame = 0 
Query:   16 RNTFFHNLCTSALEEGYHQAFCEIFNLVGEARKNFASEENRRKDAI----PLEEDRVKATHLKEILIHIEKWKRQGRVDKMYDEQLALATYFDEHQDFFLADHFYLCAYNTSKQIRSDGGKKEAEANQNLGKVSERKKEYKNAIELYEKFYRLSKDKPWNTSDGILLSNVGCRYLLSAHVSFAEQLYPYSEMRKDVLDHLHTAHQLAKEGSITEEVGRIGYLIGNKYDFYGDQQSALQYHTEYYNFCKQTGDDIGLGKACQALAVANKRQGNYDQAIENLKQLLKVTSSSSDIEIRQQACSDIGIVYNLMGKYEQAANYFRQSYELSLNKLPQSKLKHSSCEYGISLAHGLLTGESESISFNNKKSIESLLFWKSERLQNFSSDHVT 398
            RN++  N+C   L +GYH++F E+F L+   R +   E  R +       PLEE   K  +L   L   E  +R+   + +++   ALA YF+  +D ++ +HFY   +  ++ I+ D GKKEAEA+ ++G + E   +   A E YE F++L++ + W    G  L+ + C  LL  +   ++++    E  K  +  L  A ++AKEGS  +      Y +G  +    + ++AL     Y        DD+ LG+  +A+A   + QG   +AI+ LK+ +K+  ++       +A + +G +YN  G Y +A+  F+Q+++ ++  +    +  +   YGI+ AH ++   +  I   +  S+  LL WK  R  N   D VT
Sbjct:   61 RNSYKKNICVDMLRDGYHKSFTELFALM--ERWDALREAARVRSLFWLQKPLEEQPDKLDYLYHYLTRAEDAERKESFEDVHNNLYALACYFNNSEDKWVRNHFYERCFKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLACESLLRTYRLLSDKMLENKEY-KQAIKILIKASEIAKEGSDKKMEAEASYYLGLAHLAAEEYETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMTEAIKYLKKFVKIARNNFQSLDLVRASTMLGDIYNEKGYYNKASECFQQAFDTTVELMSMPLMDETKVHYGIAKAHQMMLTVNNYIESADLTSLNYLLSWKESR-GNIEPDPVT 443
The following BLAST results are available for this feature:
BLAST of TCONS_00063698-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC294.929e-4227.91Tetratricopeptide repeat protein 29 OS=Homo sapien... [more]
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