TCONS_00063469-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063469-protein
Unique Name	TCONS_00063469-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	337

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063469-protein ID=TCONS_00063469-protein|Name=TCONS_00063469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MEKEESFDIVNESDYNLLRHQVPWQYQESYILTGYRKSGMSIWNCMKTLI
QTNCNETLNIWTHFCPIFLFAWILIDFTLKEFVIDDPFYWPLYVCVVGMM
GFCIMSSLAHTFNALSMDSLYTCFYMDYAFISIYSSTSWLASYLYTRPLD
TDIHLLNNAPFLAFVTLKICLISTFQCCCTFRTHMKLEHAIRASSFFVPW
LNCVFPYIYRALSCKSPIDCDTSSVPYFGGHVIFILICAVTISTRFPERL
SPGTFDFIGQSHQIMHVCAIFSSYFQMLCIKNEMLLREDELRMTEINIQY
SKYTFHFLVVAVVLDVLTANLFRFISKNYYSKTNKIE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039779	XLOC_039779	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063469	TCONS_00063469	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004254	AdipoR/HlyIII-related

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004254	AdipoR/Haemolysin-III-related	PFAM	PF03006	HlyIII	coord: 53..277 e-value: 1.8E-27 score: 96.4

Blast

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BLAST of TCONS_00063469-protein vs. Swiss-Prot (Human)
Match: PAQR5 (Membrane progestin receptor gamma OS=Homo sapiens GN=PAQR5 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.087e-39
Identity = 90/284 (31.69%), Postives = 140/284 (49.30%), Query Frame = 0

Query:   21 QVPWQYQESYILTGYRKSGMSIWNCMKTLIQTNCNETLNIWTHFCPIFLFAWILIDFTLKEFVIDDPFYWPLYVCVVGMMGFCIMSSLAHTFNALSMDSLYTCFYMDYAFISIYSSTSWLASYLYTRPLDTDIHLLNNAPFLAFVTLKICLISTFQCCCTFRTHMK--LEHAIRASSFFVPWLNCVFPYIYRALSCKSPIDCDTSSVPYFGGHVIFILICAVTISTRFPERLSPGTFDFIGQSHQIMHVCAIFSSYFQMLCIKNEMLLREDELRMTEINIQYSK 302
            Q+P  + E  IL GYR    S   C+ +L Q   NETLNIWTH  P + FAW  +       + +D + WP+ V +     + ++SS AHTF+++S ++ + C+++DY  ++++S  S +A   YT P D  +    +  ++A   L   L +   C   F    K  L   IR  +F  P+     P  YR             +  Y   H+I  L+ +   S   PERL+PG FD+IG SHQ+ HVC I +++ QM  I  +  LR++ L  T     +S+
Sbjct:   14 QIPQVFHEQGILFGYRHPQSSATACILSLFQMT-NETLNIWTHLLPFWFFAWRFVTALYMTDIKNDSYSWPMLVYMCTSCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYSAYTFP-DALMCTTFHDYYVALAVLNTILSTGLSCYSRFLEIQKPRLCKVIRVLAFAYPYTWDSLPIFYRLFLFPGE-SAQNEATSYHQKHMIMTLLASFLYSAHLPERLAPGRFDYIGHSHQLFHVCVILATHMQMEAILLDKTLRKEWLLATSKPFSFSQ 294

The following BLAST results are available for this feature:

BLAST of TCONS_00063469-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
PAQR5	3.087e-39	31.69	Membrane progestin receptor gamma OS=Homo sapiens ...	[more]

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TCONS_00063469-protein (polypeptide) - C. hemisphaerica

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