TCONS_00063460-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063460-protein
Unique NameTCONS_00063460-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length494

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063460-protein ID=TCONS_00063460-protein|Name=TCONS_00063460-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
MDKYEPENFPLTKGDLNHNGGLLARPLERSEQYRTQFGSNFSFHLTDVHN
RTEKKQLNGDTEYGHENPKKVKRVRELNEKIRGYIDGFTVHGLTRVLTAP
RKESAFWFITLASALLMAVIVVQGLMSKYYRHEVYTEIRSIVTDKNRFPS
ISFCEFNLLKRSYFAYCGGHIKAANNVTCNLDDIPVPQDVNHTGQDYWSN
GMFEIRECITWGHGKCVISELVQSKKDLNHSCFTWNYEGTFHDMYSHVTL
IIEFKKPSWMTNRPHIIAVPHDSKIKEIDMTMAIDLNKQKKNQLTMGLTQ
VQRKEAPFPSKCINGGRDIDLLPGIYARRTCAETQIHTNIFKKCGDTTDY
MRPYIQNAVSPNRTRFTNMTEVTNCIYAMSENLKATSYSTGCPFPCRELE
IATFTHHAECDEDTERYISKDNDFYYQVELQLQNVDSYKIMEEKEMYPWD
QMACEIGGFLGLVMGASMLSMIEIIACTWFYGIKRGKYGGKNEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039773XLOC_039773Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063460TCONS_00063460Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450Expect = 6.2E-30 / Score = 104.4Expect = 0.44 / Score = 10.4SequencePF00858G3DSA:1.10.287.770G3DSA:1.10.287.770mobidb-lite
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 84..475
e-value: 6.2E-30
score: 104.4
NoneNo IPR availableGENE3D1.10.287.770coord: 89..316
e-value: 0.44
score: 10.4
NoneNo IPR availableGENE3D1.10.287.770coord: 422..481
e-value: 5.8E-11
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063460-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450Sequence
Match NameE-valueIdentityDescription
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