TCONS_00063458-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063458-protein
Unique NameTCONS_00063458-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063458-protein ID=TCONS_00063458-protein|Name=TCONS_00063458-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
MASHENGKLMMEDGVQYSDSKKKRKQENLDQRINDYVDGFTVHGLTKVFR
SNKRESCVWIIFILTGVLFASVVIGRLLSKYYKFATYTDVQRIITDHNTL
PSLTVCDFKAMQIEYFSYCGQQFTNWNNGDTICDYTKMMNLPNPDDLPYQ
NTSVWRNALFEVIHCKTWSTETPCTKTPNITSRMNGACFTWNYNGDFHDD
YGHLELKFKLRNNDSIEQRDIVVLPHDSDNVEIDLMKRIAIESAVKYQIT
IGKTLLLRKPEPYSGCQDRAGSDDLDIFPGAYSRHTCIETYKQMNIFKKC
GGVFDHIRKYLPESSISRYEDKNKTLNEIKSCIGKEIEAKGPPKELCPFP
CKELELRLSPHSYKSSESKKNVYDVELQLESVDSYTLMEEQPIYSLEQMS
AEIGGFLGLVMGASLLSFIELFVCGMLFTFRKVHG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039771XLOC_039771Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063458TCONS_00063458Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400Expect = 7.8E-36 / Score = 123.9SequencePR01078PF00858G3DSA:1.10.287.770G3DSA:1.10.287.820
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPRINTSPR01078AMINACHANNELcoord: 390..404
score: 25.87
coord: 250..266
score: 30.35
coord: 96..112
score: 23.29
coord: 404..420
score: 48.94
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 36..422
e-value: 7.8E-36
score: 123.9
NoneNo IPR availableGENE3D1.10.287.770coord: 364..432
e-value: 1.3E-10
score: 40.6
NoneNo IPR availableGENE3D1.10.287.820coord: 259..351
e-value: 7.0E-4
score: 19.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063458-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400Sequence
Match NameE-valueIdentityDescription
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