TCONS_00063268-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063268-protein
Unique NameTCONS_00063268-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063268-protein ID=TCONS_00063268-protein|Name=TCONS_00063268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
MAAVDYYQNTSVDSLSSLSNIGRHSLEKFSRSIEVPGADFALPNTNDPVG
FLNECTNGKNKIDIKFNHGTTTLAFKFQHGVIVAVDSRASAGSYIASGTV
KKVIEINPYLLGTMAGGAADCSFWERLLAKECRLYQLRNKERISVAAASK
ILANMVYQYKGMGLSMGTMICGWDKKGPGLYYVDDEGSRYKNDLFSVGSG
STYAYGVLDANHRYDLSVEEAYDLGQRAIYHATHRDAASGGVVNLYHMQE
TGWIKVSQTDVTELHYRYKEEA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039650XLOC_039650Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063268TCONS_00063268Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 234..245
score: 64.2
coord: 77..92
score: 64.91
coord: 198..209
score: 73.48
coord: 209..220
score: 42.42
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 67..247
e-value: 2.4E-49
score: 167.3
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 63..272
e-value: 6.7E-65
score: 218.3
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 50..269
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 73..120
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 69..248
score: 58.08
NoneNo IPR availableCDDcd03761proteasome_beta_type_5coord: 70..257
e-value: 5.00036E-141
score: 396.615

Blast
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BLAST of TCONS_00063268-protein vs. Swiss-Prot (Human)
Match: PSB5 (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3)

HSP 1 Score: 338.961 bits (868), Expect = 3.008e-118
Identity = 159/205 (77.56%), Postives = 181/205 (88.29%), Query Frame = 0 
Query:   64 IKFNHGTTTLAFKFQHGVIVAVDSRASAGSYIASGTVKKVIEINPYLLGTMAGGAADCSFWERLLAKECRLYQLRNKERISVAAASKILANMVYQYKGMGLSMGTMICGWDKKGPGLYYVDDEGSRYKNDLFSVGSGSTYAYGVLDANHRYDLSVEEAYDLGQRAIYHATHRDAASGGVVNLYHMQETGWIKVSQTDVTELHYRY 268
            I+  HGTTTLAFKF+HGVIVA DSRA+AG+YIAS TVKKVIEINPYLLGTMAGGAADCSFWERLLA++CR+Y+LRNKERISVAAASK+LANMVYQYKGMGLSMGTMICGWDK+GPGLYYVD EG+R     FSVGSGS YAYGV+D  + YDL VE+AYDL +RAIY AT+RDA SGG VNLYH++E GWI+VS  +V +LH +Y
Sbjct:   54 IEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHEKY 258
The following BLAST results are available for this feature:
BLAST of TCONS_00063268-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSB53.008e-11877.56Proteasome subunit beta type-5 OS=Homo sapiens GN=... [more]
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