TCONS_00063090-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063090-protein
Unique NameTCONS_00063090-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063090-protein ID=TCONS_00063090-protein|Name=TCONS_00063090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MADDALTEGAKLYQKELRYITELEGDVEGMKFTIKGEGTGDATTGTVKSK
YICTTGDLPVPWATILSSISYGVLCFAKYPRHIADFFKSTQPDGYSQERT
IKFDNDGQYDVKAKVTYEEGTVYNRVNLKGTGFKSNGNILGMRILYHCPP
HCVYVLPDRKNGGMRLEFNKAFDVMGGGHQLARHAQFNKPLGAWEEDYPG
YHHMSFWTSFGKDPDDDDTDHLTIVEIIKAIDLETYR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039517XLOC_039517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063090TCONS_00063090Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000786Green_fluorescent_prot
IPR011584GFP-related
IPR009017GFP
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0008218bioluminescence
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008218 bioluminescence
biological_process GO:0006091 generation of precursor metabolites and energy
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000786Green fluorescent protein, GFPPRINTSPR01229GFLUORESCENTcoord: 133..152
score: 45.0
coord: 75..90
score: 32.5
coord: 112..132
score: 42.86
coord: 176..195
score: 45.0
coord: 33..53
score: 52.38
coord: 196..214
score: 31.58
coord: 8..32
score: 40.0
coord: 153..174
score: 22.73
coord: 54..74
score: 60.0
IPR011584Green fluorescent protein-relatedPFAMPF01353GFPcoord: 14..225
e-value: 7.3E-47
score: 159.6
NoneNo IPR availableGENE3D2.40.155.10coord: 17..230
e-value: 6.9E-59
score: 198.6
IPR009017Green fluorescent proteinSUPERFAMILY54511GFP-likecoord: 7..231

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063090-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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