TCONS_00062497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062497-protein
Unique NameTCONS_00062497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length640

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062497-protein ID=TCONS_00062497-protein|Name=TCONS_00062497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=640bp
QRKKFCVHLHLVALARKLKEGIIDQLSYAKVNPTKDSNLTEKTPKSELAE
ISTAVTNTILIQKSRKIPLDIPPTVLAESLKLDETIEVYVPEETDCSLCG
SALTDPMNQKGMEHGYLITEVVSFKKIKIKIKKCKNSDCNATVVLFPYNK
GLFNISNKVLLSLSIMVEWREFLKDGTPVTNFITRKLKGLQLKLPVASRL
KASEFDYLIKTIYNGYYAFEAMTERNLVDAVCGICGIAGKLYFGDGNEKN
CTSIKEVNLDDNLESIHSLTSTDYQTNMMDVLTSHLLEKGAYSKHVPSLS
LNLSDIPPLISPLMRSHEINTETEKRSTYLDDTDEVEGDAMMLSKILRDK
KTTIDSIETMSANELKDLAKSCNIKTSKNGSKKSQAMLKLNLKQLYATIL
VGTSACHQFVKSPGHTGGFYHLVCPHGTTVASKFMILTESVRDAADLYLS
LKFPPVMFVCDTPCTLVQHINNRSPEHAEHFWGENDGCFEKPNLENDPEK
MMNIPIVVPPEFQDEDEETKEIALDKPFCHPLTQSSRRFICGDRFHTKTN
PHKSQLCEFHNIDLCLQSTCIKTSYPESLNNKKNNKRNRSACTQNLAHHI
YYNYLMDYYDNLEIVQEQKAALSIYEKEVTRDELLRFVFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039161XLOC_039161Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062497TCONS_00062497Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00062497-protein vs. Swiss-Prot (Human)
Match: HMGX3 (HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 7.501e-53
Identity = 151/537 (28.12%), Postives = 235/537 (43.76%), Query Frame = 0 
Query:   89 YVPEETDCSLCGSALTDPMNQK--GMEHGYLITEVVSFKKIKIKIKKCKNSDCNATVVLFPYNKGLFNISNKVLLSLSIMVEWREFLKDGTPVTNFITRKLKGLQLKLPVASRLKASEFDYLIKTIYNGYYAFEAMTERNLVDAVCGICGIAGKLYFGDGNEKNCTSIKEVNLD-DNLESIHSLTSTDYQTNMMDVLTSHLLEKGAYSKHVPSLSLNLSDIPPLISPLMRSHEI-NTETEKRSTYLDDTDEVEGDAMMLSKILRDKKTTIDSIETMSANELKDLAKSCNIKTSKNGSKKSQAMLKLNLKQLYATILVGTSACHQFVKSPGH-TGGFYHLVCPHGTTVASKFMILTESVRDAADLYLSLKFPPVMFVCDTPCTLVQHINNRSPEHAEHFWGENDGCFEKPNLENDPEKMMNIPIVVP-PEFQDEDEETKEIALDKPFCHPLTQSSRRFICGDRFHTKTNPHKSQL-CEFHNIDLCLQSTCIKTSYPESLNNKKNNKRNRSACTQNLAHHIYYNYLMDYYDNLEIVQEQ 618
            Y    T C LC S L         G +  +L+T     + +  ++K C N  C A         GLFN+ NK+L+SL ++   R  +K G      I   LK +Q +      L + E   L + + NGY+AFE +T R+  D +CGICG+A K+     +E+N  ++K V          + +   D+   M     + ++E+ A+   +P    + S I P   PLMR   + NTE +K      D   V G    L ++L++    +D I + S  +L+ L + C I     G++ S+  L  +L  LY ++  G  A    ++ P H TGG  + VCPH     SK+++  ES RD  DL  S +  P ++V D   ++    +   PE     WG N GCF  P            P+ V  PE  D+         +    HP+T+++ R I     H    P+        H++ LC +     T     +++K N  R R     N  H+  YN LMD+  + EIV  Q
Sbjct:  988 YESPSTQCLLCSSPLFKGGQNSLAGPQECWLLT-ASRLQTVTAQVKMCLNPHCLALHSFIDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSINVVLKSVQEQ--TEKTLTSEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSEENVLALKSVEFTWPEFLGSNEVNVEDFWATM----ETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNL----DVQPVPGSGSALVRLLQEGTCKLDEIGSYSEEKLQHLLRQCGIPF---GAEDSKDQLCFSLLALYESVQNGARA----IRPPRHFTGGKIYKVCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPT---------EPPVSVSCPELLDQHYTVDMTETEHSIQHPVTKTATRRI----VHAGLQPNPGDPSAGHHSLALCPELAPYATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQ 1493
The following BLAST results are available for this feature:
BLAST of TCONS_00062497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGX37.501e-5328.12HMG domain-containing protein 3 OS=Homo sapiens GN... [more]
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