Unc (polypeptide) - C. hemisphaerica

Overview
NameUnc
Unique NameTCONS_00062480-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062480-protein ID=TCONS_00062480-protein|Name=Unc|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MDSKEESGTQNDTIPSPDSVDYGCPCCQPKRRYPPPPWYHQHYSSYHHHQ
HRPPSTEGSRWPFISPPPPLPPSSSPPHRSPPPPPTAMKGCCDKRTCYTP
LHHQFHHHSPHYDTFFGHHDMSEPLAQFHRQKRFRRMRMRTNFTSWQLDE
LENAFQKTHYPDVFMREELAMKLQLLESRVQVWFQNRRAKWRKRERHIED
GGGATGENNNEKDDVIQDATKDQSPSSSPFSLVDENDVTDREIDITMAGN
RENRVDERRIPISTHKVSKSHNSSGKKQFCIENILTDKISNNKKFQQSSS
NINTKTEYEPIIISTRFSGDSLTHPHQYCESPSPVNSCGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039146XLOC_039146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062480TCONS_00062480Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 136..198
e-value: 5.6E-26
score: 102.3
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 138..193
e-value: 2.7E-23
score: 81.4
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 134..194
score: 19.629
NoneNo IPR availableGENE3D1.10.10.60coord: 134..199
e-value: 4.1E-28
score: 96.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..239
NoneNo IPR availableCDDcd00086homeodomaincoord: 138..195
e-value: 7.72958E-23
score: 88.8396
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 169..192
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 118..195

Blast
[Close]
BLAST of Unc vs. Swiss-Prot (Human)
Match: UNC4 (Homeobox protein unc-4 homolog OS=Homo sapiens GN=UNCX PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.710e-27
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:  135 RRMRMRTNFTSWQLDELENAFQKTHYPDVFMREELAMKLQLLESRVQVWFQNRRAKWRKRE 195
            +R R RTNFT WQL+ELE AF ++HYPDVFMRE LA++L L+ESRVQVWFQNRRAKWRK+E
Sbjct:  104 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWRKKE 164
The following BLAST results are available for this feature:
BLAST of Unc vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNC43.710e-2775.41Homeobox protein unc-4 homolog OS=Homo sapiens GN=... [more]
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