TCONS_00062321-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062321-protein
Unique NameTCONS_00062321-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062321-protein ID=TCONS_00062321-protein|Name=TCONS_00062321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
KSHKIFFTKINLKGKRWLFKMLIALLYLLTFNPQGIRCGLVRFRFVGRNV
AISGQPVPWHEMESTHFDFCFRKCIIIKCHYIEYEKLMITSTDVWSCKLY
GLIRSISDHLVTKLGSILYNAEQPYVDCDDWFRSGYKNSGVYEITFNGKQ
RDVYCNMDDVKSEGWTVIQKRIDGSVDFNQNWSGYKTGFGQPESEYWLGN
NDIHFLTSIQNRTVYLKISATTFESESTHVVYKGFNIENEENKYKLHTGL
FFSGKSLNKNDFLNHDNMYFSTPEIDNDVSGQYDCAGGRIAGFWYFSCAN
MTPNGKYYSNQSDCMRRLSLHWYSFKGDGYCLKTFEMAIRITPQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039059XLOC_039059Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062321TCONS_00062321Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 123..342
e-value: 9.2E-45
score: 164.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 126..340
e-value: 2.4E-51
score: 174.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 119..343
score: 39.619
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 120..340
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 95..267
e-value: 8.1E-45
score: 152.6
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 268..334
e-value: 1.9E-15
score: 56.2

Blast
[Close]
BLAST of TCONS_00062321-protein vs. Swiss-Prot (Human)
Match: FGL1 (Fibrinogen-like protein 1 OS=Homo sapiens GN=FGL1 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 7.495e-37
Identity = 93/246 (37.80%), Postives = 134/246 (54.47%), Query Frame = 0 
Query:  108 DHLVTKLGSILYNAEQPYVDCDDWFRSGYKNSGVYEIT--FNGKQRDVYCNMDDVKSEGWTVIQKRIDGSVDFNQNWSGYKTGFG---QPESEYWLGNNDIHFLTSIQNRTVYLKISATTFESESTHVVYKGFNIENEENKYKLHTGLF--FSGKSLNKND------FLNHDNMYFSTPEIDNDVSGQYDCAGGRIAGFWYFSCANMTPNGKYYSNQSDCMRRLSLHWYSFKGDGYCLKTFEMAIR 340
            ++ V  LGS     ++ Y DC + F  GYK SG Y+I    +  +  VYC+M D    GWTVIQ+R DGS +FN+ W  Y+ GFG   Q   EYWLGN ++HFLT+ ++ T  LKI    FE  S +  YK F + +E+N Y+L+ G +   +G SL  N       + +H  M FST + D+D + + +CA    +G+W+  C +   NG YYS          + WY++ G  Y LK+  M IR
Sbjct:   68 ENTVIDLGS-----KRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMSD--GGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYT--LKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHD-NYEGNCAEEDQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIR 303
The following BLAST results are available for this feature:
BLAST of TCONS_00062321-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL17.495e-3737.80Fibrinogen-like protein 1 OS=Homo sapiens GN=FGL1 ... [more]
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