TCONS_00062318-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062318-protein
Unique NameTCONS_00062318-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length148

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062318-protein ID=TCONS_00062318-protein|Name=TCONS_00062318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
MNKKLKLLNIASYLRRRLDKPKASEVLTSHLRQRGLPYWTSYFVPYHSVH
NDQFGSSHFNWEVDGENYHILRTGCWPYMKYHCSKASYIDLEFQNKFFTF
LKLINFGVPTLAYGLISVYLVSCFEDVATQKGVVTLHFHIPENKDAMF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039056XLOC_039056Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062318TCONS_00062318Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029245DUF4528
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029245Protein of unknown function DUF4528PFAMPF15031DUF4528coord: 20..145
e-value: 5.6E-59
score: 197.6

Blast
[Close]
BLAST of TCONS_00062318-protein vs. Swiss-Prot (Human)
Match: CO061 (Uncharacterized protein C15orf61 OS=Homo sapiens GN=C15orf61 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.464e-52
Identity = 80/146 (54.79%), Postives = 101/146 (69.18%), Query Frame = 0 
Query:    5 LKLLNIASYLRRRLDKPK--ASEVLTSHLRQRGLPYWTSYFVPYHSVHNDQFGSSHFNWEVDGENYHILRTGCWPYMKYHCSKASYIDLEFQNKFFTFLKLINFGVPTLAYGLISVYLVSCFEDVATQKGVVTLHFHIPENKDAMF 148
            L+LL    +  R   +PK  ASEVLT HL QR LP+WTS+ VPY +V NDQFG SHFNW V G NYH+LRTGC+P++KYHCSKA + DL  QN+FFT LK++N G+PTL YGL S       E V T  G +T++F   E++ AM+
Sbjct:   12 LRLLLCRPWASRAAARPKPSASEVLTRHLLQRRLPHWTSFCVPYSAVRNDQFGLSHFNWPVQGANYHVLRTGCFPFIKYHCSKAPWQDLARQNRFFTALKVVNLGIPTLLYGLGSWLFARVTETVHTSYGPITVYFLNKEDEGAMY 157
The following BLAST results are available for this feature:
BLAST of TCONS_00062318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CO0612.464e-5254.79Uncharacterized protein C15orf61 OS=Homo sapiens G... [more]
back to top