TCONS_00062308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062308-protein
Unique NameTCONS_00062308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062308-protein ID=TCONS_00062308-protein|Name=TCONS_00062308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MAAGRGRNALMEILTNNNIQHKVIEHPAVFTVDEMMKHLTGIEDGLVTKN
LFLKDKKKKLWLLTAVHSKEVKLAEVAKTVGAPGGLRFADEAIMIEKLGV
AQGCATPLAIFNDSNNDVRLIVDSDLLAENRMVYXVTFD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039047XLOC_039047Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062308TCONS_00062308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007214YbaK/aa-tRNA-synth-assoc-dom
Vocabulary: Molecular Function
TermDefinition
GO:0002161aminoacyl-tRNA editing activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0002161 aminoacyl-tRNA editing activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainGENE3D3.90.960.10coord: 2..135
e-value: 5.2E-22
score: 77.7
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 26..133
e-value: 3.9E-21
score: 75.3
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainSUPERFAMILY55826YbaK/ProRS associated domaincoord: 8..133

Blast
[Close]
BLAST of TCONS_00062308-protein vs. Swiss-Prot (Human)
Match: PRXD1 (Putative prolyl-tRNA synthetase associated domain-containing protein 1 OS=Homo sapiens GN=PRORSD1P PE=5 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 1.934e-34
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 0 
Query:    1 MAAGRGRNALMEILTNNNIQHKVIEHPAVFTVDEMMKHLTGIEDGLVTKNLFLKDKKKK-LWLLTAVHSKEVKLAEVAKTVG-APGGLRFADEAIMIEKLGVAQGCATPLAIFNDSNNDVRLIVDSDLL 127
            MA      AL + L    I  +V+EHP VFTV+EMM H+  ++ G  +KNLFLKDKKKK  WL+T +H +++ L E+AK +G   G LRFADE  M+EKL V QGCATPLA+F D   DV+ ++DS  L
Sbjct:    1 MAGAELGAALEQRLGALAIHTEVVEHPEVFTVEEMMPHIQHLK-GAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDG-GDVKFVLDSAFL 127
The following BLAST results are available for this feature:
BLAST of TCONS_00062308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRXD11.934e-3451.16Putative prolyl-tRNA synthetase associated domain-... [more]
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