TCONS_00062182-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062182-protein
Unique NameTCONS_00062182-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062182-protein ID=TCONS_00062182-protein|Name=TCONS_00062182-protein|organism=Clytia hemisphaerica|type=polypeptide|length=125bp
MAVNPLALSKQLTHHQRVTRLYRKSLKHLLSWTMNREAWREQAVLLREKF
DENKSLTDKFQIEKVVKDAEAQFELWRHPAPYIHPKAPGGSKYERNVPPP
PNALEMLPMEEEWYKEMMDWADGKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038988XLOC_038988Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062182TCONS_00062182Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 16..74
e-value: 1.9E-8
score: 34.1

Blast
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BLAST of TCONS_00062182-protein vs. Swiss-Prot (Human)
Match: NDUB9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Homo sapiens GN=NDUFB9 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.310e-22
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 0 
Query:    6 LALSKQLTHHQRVTRLYRKSLKHLLSWTMNREAWREQAVLLREKFDENKSLTDKFQIEKVVKDAEAQFELWRHPAPYIHPKAPGGSKYER 95
            LA    LTH Q+V RLY+++L+HL SW + R+ +R  A L+R +F+E+K+  D  +  +++K+AE +F   +HP PYI P +PGG+ YER
Sbjct:    4 LASGPYLTHQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEEFWYRQHPQPYIFPDSPGGTSYER 93
The following BLAST results are available for this feature:
BLAST of TCONS_00062182-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDUB92.310e-2244.44NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
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