TCONS_00062036-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062036-protein
Unique NameTCONS_00062036-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062036-protein ID=TCONS_00062036-protein|Name=TCONS_00062036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
VIGCFNPPNQVLQILSGTYGRTNSHSCRSYSKFSNDDNKKCWHDVTKYLK
KSCDGQSGCGLQTKKIEKDFGNPCENKQTRKFLEVKFKCVSKVQTTPQIA
TTKQGKKRTTQATQTTKTTTITTTAIPPTTTTTTTTPPTPPPYLRKTLCQ
GKGSFIGCFTQGSVIRILNATFGRTDPNTCPSSNPRNDDITCYINAVPYT
KFQCEGKXNPRNDDITCFINAVPYTKFQCEGKAFCALNSDPGQYGQACKD
ISIRSFLDVKYKCVAKGSFTPKYDRTPPLIPSVPTAPSSNRTSNSSSSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038881XLOC_038881Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062036TCONS_00062036Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000922Lectin_gal-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPFAMPF02140Gal_Lectincoord: 161..263
e-value: 2.2E-4
score: 21.5
coord: 7..89
e-value: 1.4E-9
score: 38.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062036-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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