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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00061986-protein ID=TCONS_00061986-protein|Name=TCONS_00061986-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1299bp
MVYQEGTSIFQFKVGEVILAKHQGELYYAKIVSIQLNKKMVRVLFDDGSK
DEVAFNNIHSVNETTSDIICVICKQDSTESDNDIVLCDSCNVGYHQRCHQ
PCIDSSVLLPEAPWECCYCDDGNSNPYVQQNPFEKTTSNEIVKTSQDNKK
DLCNRKANLVEPKQILPLPETVVKSLSKIKIKTLEKDEETVEKMTDKTEL
LITRSDKENNKINEKKEPCCDQPIKKSRTQCQHSDGFTLEDQLVDNILGV
ISFGDNPAGGNSKPGNQYQKMSKSNKQNFKVKKIVNNKTDNDLVSRNRYA
MEFPRHNWLLERLKSENKINEGVIKVEEKKLQEKLNKEKAEERLREEQKQ
KEEKVKAKKLEETLQKRKESETRIRPNSVKSDSEIEQKKHTTDEPLKRCY
SYDPMISKNQEDIGIKILSVVSLSKDAPISIKSGQSTSMNQQPVVFQPKI
IQNDDPVGTQNDRVLPFQQDVNDDDVIICNHKDTINFSGNDCESRSAFKK
CDRFDEKDIQVVRLINKESEICIGNQPTYTSDDLTSKADNRHSPFNHSTT
EIKIPKPRNLYQMLTDSPPSVHDDFQESRTKQSPNSPNTSKPEPQTGLVI
PEPQRDLVIPEPQRDLVIPEPQRDLAIPEPQRDLAIPEPQRDLAIPEPQA
LANEKIKPRTLIDLTIPEPRTEKTSPAHQSLTKGQIKPRESTDSPMDLII
PEPQTLTKDQHKLMNPTSTTSIVIPKPRFITNEEKLQKLSTLKSFIKSRT
LPPDTKESTDTHCSKDGHLKEMVDAESITNLPVLLDKSTTHTAKPTQNDL
DRTLSPEELIKPRQPPIKTTYQPLSRDTPTTVNKSTPATLNKPPTSAIIS
NHPYTPNRDISDLKELLRNPLPKFAPKQSLVSSEYQPYDDLNHVSKKMGR
SADYPFNDGRGLTRNILYTKSRSMSERELVPKRSPMDDYPSPTRRSFKRS
PTTSDYLTLRNLRHSTSSSIEYDNLTSLKFTGNPHSEAQDSKQQIWNAQL
PIRPISPDRHLTNDTRKRLYEQITNKQPSMMRLHRRLPDIPSKHRLTEER
YRNQFATRGKEPQPSLLRSPDKSRRDVYSFMSDLQRRHDEEHAIQKSRVR
GDQIPSPPDTTKRRTRLAAEPFTLRSPPSKQQSSPPSFENHPAYKMQRSH
PRNVERIQRDTLPYRESPESELNLRELMHREKQSGLIDRRSRQIVNARYN
PYDFKHDRNNDSDDRKRFLETFHHKYPLQKGVFLNSFRRETTFIDKYLVD
GMEKKRTPRDRCRSCQKEAIFLCSGCRQVWYCSKQCQHDDWTRHMDSCN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 323..363 |
| None | No IPR available | GENE3D | 2.30.30.140 | | coord: 11..62
e-value: 1.3E-8
score: 33.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 255..274 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1035..1152 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 525..604 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 339..392 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 670..696 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 817..856 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 923..952 |
| None | No IPR available | CDD | cd04508 | TUDOR | coord: 15..58
e-value: 0.00897332
score: 34.8812 |
| None | No IPR available | SUPERFAMILY | 144232 | HIT/MYND zinc finger-like | coord: 1259..1299 |
| IPR001965 | Zinc finger, PHD-type | SMART | SM00249 | PHD_3 | coord: 69..120
e-value: 1.8E-4
score: 30.9 |
| IPR002999 | Tudor domain | SMART | SM00333 | TUDOR_7 | coord: 10..66
e-value: 1.3E-5
score: 34.7 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 63..123
e-value: 1.3E-8
score: 34.0 |
| IPR002893 | Zinc finger, MYND-type | PFAM | PF01753 | zf-MYND | coord: 1262..1298
e-value: 2.6E-9
score: 36.9 |
| IPR002893 | Zinc finger, MYND-type | PROSITE | PS01360 | ZF_MYND_1 | coord: 1262..1298 |
| IPR002893 | Zinc finger, MYND-type | PROSITE | PS50865 | ZF_MYND_2 | coord: 1262..1298
score: 11.603 |
| IPR019786 | Zinc finger, PHD-type, conserved site | PROSITE | PS01359 | ZF_PHD_1 | coord: 70..119 |
| IPR019787 | Zinc finger, PHD-finger | PROSITE | PS50016 | ZF_PHD_2 | coord: 67..122
score: 9.766 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 63..125 |
Blast
BLAST of TCONS_00061986-protein vs. Swiss-Prot (Human)
Match: MTF2 (Metal-response element-binding transcription factor 2 OS=Homo sapiens GN=MTF2 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 3.817e-17 Identity = 38/110 (34.55%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 11 QFKVGEVILAKHQGELYY-AKIVSIQLNKKMVRVLFDDGSKDEVAFNNIHSVNETTSDIICVICKQDSTESDNDIVLCDSCNVGYHQRCHQPCIDSSVLLPEAPWECCYC 119
+F+ G+ +LA+ L+Y I I + K+ ++F+D SK V + +I + + +++C IC+++ +E+ N++V+CD C GYHQ CH P ID SV+ + W C C
Sbjct: 45 KFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDCSVIDSDEKWLCRQC 154
The following BLAST results are available for this feature:
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