TCONS_00061951-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061951-protein
Unique NameTCONS_00061951-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length682

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061951-protein ID=TCONS_00061951-protein|Name=TCONS_00061951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=682bp
ADDEDDEAFDPSLDDIPADLRSLNINTNDENYPSPPPDSLPSLSFEISPR
KTDQLKSFTLPSGRSNRNSKRDSYNSSFYNEARSEMKKTPSSHSGSSLSD
LSQENISQERIDIPRISTSPVMSNAPKGWTVEIEPQTHDEIFINNVTKER
WKSCVDKSGRTYFYNMNGPGTTWALPEVSDSGRSKNMRRNSFGETLEGVI
RRQTVSSQRSPRNKCHSVHVRSPSSLSSEEDKSARSPVVSPRLPSKNKKI
GPKAEKAGQLMRRKVVEGRKQIKKPIWTPIYICKYDSNLVFYKDQKTASP
KPGFPTGKPESSLDLHGATLDHISKEKVKGKKYVFQIASYGGQNVHQFVA
DNQLEMGEWIVCIQATIHKLEEEEPLPPHPLQHQISNGGGGERLASPTST
IAPPNDLSPPPSTSSNKAASPMMPKKLLGSESKSGGFKGFSRRLSKRVTG
GTDEEKDKTRIKDKLKKYLSKRPSFNELESKGIIADFVFGYPLEKLCERE
DNLVPRFIVQIVHEVEKRGLDVDGIYRVSGNLSSVNKLRGLIDNGEMPDY
SQPEWNDIHLLTGCLKLYFRELPEPLLPFHLFDRFVGAMKSPFKPEKLKL
MREVVSELKAERKETLNLLLTHFNRVMSMSSKNRMHSQNIAIVFGPTLMW
PETDSINVAMTTVFQNQVIEFLVQEWNDVYTM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038839XLOC_038839Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061951TCONS_00061951Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR001849PH_domain
IPR001202WW_dom
IPR011993PH_dom-like
IPR008936Rho_GTPase_activation_prot
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 502..677
e-value: 3.8E-60
score: 215.8
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 505..654
e-value: 9.2E-45
score: 152.1
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 491..680
score: 45.755
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 254..370
e-value: 1.6E-10
score: 51.0
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 269..367
e-value: 1.3E-10
score: 41.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 253..368
score: 11.826
IPR001202WW domainSMARTSM00456ww_5coord: 146..178
e-value: 0.0064
score: 25.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 151..176
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 151..178
score: 10.679
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 147..177
IPR011993PH domain-likeGENE3D2.30.29.30coord: 244..375
e-value: 6.1E-14
score: 51.2
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 255..384
NoneNo IPR availableGENE3D2.20.70.10coord: 59..210
e-value: 9.2E-6
score: 24.8
NoneNo IPR availableGENE3D1.10.555.10coord: 438..682
e-value: 3.2E-64
score: 216.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..459
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..258
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 488..679

Blast
[Close]
BLAST of TCONS_00061951-protein vs. Swiss-Prot (Human)
Match: RHG27 (Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1 SV=3)

HSP 1 Score: 286.189 bits (731), Expect = 3.950e-85
Identity = 188/568 (33.10%), Postives = 282/568 (49.65%), Query Frame = 0 
Query:  118 TSPVMSNAPKGWTVEIEPQTHDEIFINNVTKERWKSCVDKSGRTYFYNMNGPGTTWALPEVSDSGRSKNMRRNSFGETLEGVIRRQTVSSQRSPRNKCHSVHVRSPSSLSSEEDKSARSPVVSPRLPSKNKKIGPKAEKAGQLMRRKVVEGRKQIKKPIWTPIYICKYDSNLVFYKDQKTASP----KPG-FPTGKPESSLDLHGATLDHISKEKVKGKKYVFQIASYGGQNVHQFVADNQLEMGEWIVCIQATIHKLEEEEPLPPHPLQHQISNGGGGERLASPTSTIAPPNDLSPPPSTSSNKAASPMMPKKLLGSESKSGGFKGFSRRLSKRVTGGTDEEKDKTRIKDKLKKYLSKRPSFNELESKGIIADFVFGYPLEKLCEREDNLVPRFIVQIVHEVEKRGLDVDGIYRVSGNLSSVNKLRGLIDNGEMPDYSQPEWNDIHLLTGCLKLYFRELPEPLLPFHLFDRFVGAMKSPFKPEKLKLMREVVSELKAERKETLNLLLTHFNRVMSMSSKNRMHSQNIAIVFGPTLMWPETDSINVAMTTVFQNQVIEFLVQEWNDVY 680
            TSP+ +  P GW+  +  Q    ++ N+ T+E+W    D  G+ YFYN       W LP+V         + +  G+T           +Q SP  +           + +E D+      VSP   +   K     +KAG L R K  +  K+++K  W+  +       L F+KD KT++     +P  F T  PE +++L GATL    K+K   +K V ++ S  G   +    D++  +  W   I   I +L  E  LPP   +    + G  ERL S         D  P      N AA  + P  L                           E D ++++ KL+K+L +RP+   L  KG I D VFG  L  LCERE + VPRF+ Q +  VE RGLD+DG+YR+SGNL+++ KLR  +D+ E  D     W D+H++TG LKL+FRELPEPL PF  F +F+ A+K   +  + + +R++V  L A   +TL +L  H  RV+    +NRM  Q++AIVFGPTL+ PE +  ++ MT VFQNQV+E ++Q+  D++
Sbjct:  387 TSPLTT--PPGWSCHVS-QDKQMLYTNHFTQEQWVRLEDPHGKPYFYNPEDSSVRWELPQVPVPAPRSIHKSSQDGDT----------PAQASPPEE----------KVPAELDEVGSWEEVSPATAAVRTKT---LDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFST--PEYTVELRGATLSWAPKDK-SSRKNVLELRSRDGSE-YLIQHDSEAIISTWHKAIAQGIQELSAE--LPPEESESSRVDFGSSERLGSWQEK---EEDARP------NAAAPALGPVGL---------------------------ESDLSKVRHKLRKFLQRRPTLQSLREKGYIKDQVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDERLDLDDGRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLRPEVEETSMPMTMVFQNQVVELILQQCADIF 886
The following BLAST results are available for this feature:
BLAST of TCONS_00061951-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG273.950e-8533.10Rho GTPase-activating protein 27 OS=Homo sapiens G... [more]
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