TCONS_00061359-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061359-protein
Unique Name	TCONS_00061359-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	354

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061359-protein ID=TCONS_00061359-protein|Name=TCONS_00061359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
FSLGRTRNLQRVRIEMKEINEYVYNRLWFTYRRNFLPIGGTGPTSDAGWG
CMLRCGQMMLGQALQCRHLGRDWSWERDKRNTKYMQILREFLDKKDSLYS
IHQIAQMGVGEGKSVGQWFGPNTIAQVIRKLVLFDDANDIAVHVAMDNTV
VIEDLRKLCKSNMDTWGCYGECSSSHNETPPLPTPTKEGECCNVNKRRKT
RFSSSSSNEKQSTASWRPLLLFIPLRLGLSETNPTYFTALKAMFTLKQNI
GIIGGKPNHAHYFIGFNGDRLLYLDPHTTQPALQMERYNCIPDTSYHTEA
PCFMNFSALDPSIALGFYCHTEEELNDWVSAVREVSHCCFLFLDKFFKII
YCSE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038499	XLOC_038499	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061359	TCONS_00061359	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH_dom-like
IPR005078	Peptidase_C54

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 129..339 e-value: 0.0015 score: 17.8
IPR005078	Peptidase C54	PFAM	PF03416	Peptidase_C54	coord: 17..330 e-value: 1.7E-96 score: 322.6
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 15..338

Blast

[Close]

BLAST of TCONS_00061359-protein vs. Swiss-Prot (Human)
Match: ATG4B (Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B PE=1 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 1.095e-120
Identity = 171/336 (50.89%), Postives = 224/336 (66.67%), Query Frame = 0

Query:    3 LGRTRNLQRVRIEMKEINEYVYNRLWFTYRRNFLPIGGTGPTSDAGWGCMLRCGQMMLGQALQCRHLGRDWSWERDKRNT-KYMQILREFLDKKDSLYSIHQIAQMGVGEGKSVGQWFGPNTIAQVIRKLVLFDDANDIAVHVAMDNTVVIEDLRKLCKSNMDTWGCYGECSSSHNETPPLPTPTKEGECCNVNKRRKTRFSSSSSNEKQSTASWRPLLLFIPLRLGLSETNPTYFTALKAMFTLKQNIGIIGGKPNHAHYFIGFNGDRLLYLDPHTTQPALQMERYNCIPDTSYHTE-APCFMNFSALDPSIALGFYCHTEEELNDWVSAVREVS 336
            LGR  +   +  E  EI   V +RLWFTYR+NF  IGGTGPTSD GWGCMLRCGQM+  QAL CRHLGRDW W + KR    Y  +L  F+D+KDS YSIHQIAQMGVGEGKS+GQW+GPNT+AQV++KL +FD  + +AVH+AMDNTVV+E++R+LC++++   G     + S       P                     + +      + WRPL+L IPLRLGL++ N  Y   LK  F + Q++G+IGGKPN AHYFIG+ G+ L+YLDPHTTQPA++      IPD S+H +  PC M+ + LDPSIA+GF+C TE++ NDW   V+++S
Sbjct:   29 LGRKYS---IFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFP---------------------AGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLS 340

The following BLAST results are available for this feature:

BLAST of TCONS_00061359-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATG4B	1.095e-120	50.89	Cysteine protease ATG4B OS=Homo sapiens GN=ATG4B P...	[more]

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TCONS_00061359-protein (polypeptide) - C. hemisphaerica