TCONS_00061129-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061129-protein
Unique NameTCONS_00061129-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061129-protein ID=TCONS_00061129-protein|Name=TCONS_00061129-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MDDKKVGFIGAGNMAYAIGKALVSSGVIKAGNIMASARTRTRLDTCWKEL
GTKSTLDNEEVVKFADIIFLSVKPHLICDVIKQIKQSSGPAKLFISVAAG
ITIATINETFGVPTRIVRTMPNTPCMVECGVIVYALSSECLPSDGEMIKT
MLDPIGLIEEVPEKQIDSVTSLMGCSIAWYQMVIEAMADGGVKNGVPRAL
AYKMAAKSMEGSAKLVLETGNAPGVLKDQVTSPGGSTICGLYELEQSGIR
GAFMKAVDAATKRNQDLGKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038354XLOC_038354Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061129TCONS_00061129Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000304Pyrroline-COOH_reductase
IPR028939P5C_Rdtase_cat_N
IPR029036P5CR_dimer
IPR0089276-PGluconate_DH_C-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004735pyrroline-5-carboxylate reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006561proline biosynthetic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006561 proline biosynthetic process
molecular_function GO:0004735 pyrroline-5-carboxylate reductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 257..270
NoneNo IPR availableGENE3D1.10.3730.10coord: 166..270
e-value: 2.6E-38
score: 130.2
NoneNo IPR availableGENE3D3.40.50.720coord: 1..165
e-value: 2.2E-26
score: 92.5
IPR000304Pyrroline-5-carboxylate reductasePIRSFPIRSF000193P5CRcoord: 3..270
e-value: 1.8E-78
score: 261.2
IPR000304Pyrroline-5-carboxylate reductaseTIGRFAMTIGR00112TIGR00112coord: 6..267
e-value: 1.6E-78
score: 261.9
IPR000304Pyrroline-5-carboxylate reductasePROSITEPS00521P5CRcoord: 222..245
IPR000304Pyrroline-5-carboxylate reductaseHAMAPMF_01925P5C_reductasecoord: 4..267
score: 24.556
IPR028939Pyrroline-5-carboxylate reductase, catalytic, N-terminalPFAMPF03807F420_oxidoredcoord: 5..100
e-value: 5.9E-20
score: 71.6
IPR029036Pyrroline-5-carboxylate reductase, dimerisation domainPFAMPF14748P5CR_dimercoord: 163..267
e-value: 5.5E-36
score: 122.9
IPR0089276-phosphogluconate dehydrogenase C-terminal domain-likeSUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 162..269
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..161

Blast
[Close]
BLAST of TCONS_00061129-protein vs. Swiss-Prot (Human)
Match: P5CR3 (Pyrroline-5-carboxylate reductase 3 OS=Homo sapiens GN=PYCR3 PE=1 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 7.125e-66
Identity = 103/269 (38.29%), Postives = 172/269 (63.94%), Query Frame = 0 
Query:    2 DDKKVGFIGAGNMAYAIGKALVSSGVIKAGNIMASARTRTRLDTCWKELGTKSTLDNEEVVKFADIIFLSVKPHLICDVIKQIKQSSGPAKLFISVAAGITIATINETFGVPTRIVRTMPNTPCMVECGVIVYALSSECLPSDGEMIKTMLDPIGLIEEVPEKQIDSVTSLMGCSIAWYQMVIEAMADGGVKNGVPRALAYKMAAKSMEGSAKLVLETGNAPGVLKDQVTSPGGSTICGLYELEQSGIRGAFMKAVDAATKRNQDLGKK 270
              ++VGF+GAG MA AI + L+ +G ++A +I+ASA T   L   ++ LG ++T  N+EV++   ++  + KPH++  V+ ++        + +SVAAG++++T+ E     TR++R +PN PC+V+ G IV A       S+ ++++ +L+  G  EEVPE  +D  T L G  +A+     EA+A+G VK G+P +LA+++AA+++ G+AK++L  G  P  L+  V +PGG+TI GL+ LEQ G+R A M AV+AAT R ++L +K
Sbjct:    7 SPRRVGFVGAGRMAGAIAQGLIRAGKVEAQHILASAPTDRNLCH-FQALGCRTTHSNQEVLQSCLLVIFATKPHVLPAVLAEVAPVVTTEHILVSVAAGVSLSTLEELLPPNTRVLRVLPNLPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLSGSGVAFVCAFSEALAEGAVKMGMPSSLAHRIAAQTLLGTAKMLLHEGQHPAQLRSDVCTPGGTTIYGLHALEQGGLRAATMSAVEAATCRAKELSRK 274
The following BLAST results are available for this feature:
BLAST of TCONS_00061129-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P5CR37.125e-6638.29Pyrroline-5-carboxylate reductase 3 OS=Homo sapien... [more]
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