TCONS_00060920-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060920-protein
Unique NameTCONS_00060920-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length761

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060920-protein ID=TCONS_00060920-protein|Name=TCONS_00060920-protein|organism=Clytia hemisphaerica|type=polypeptide|length=761bp
MSDVFQSHVLPNAKADLSQSELFTNEDTLDNKDKDFINNISSKSSKDLTP
KEQERLKHIVRKNTPVSTRIKIWLLLSGGAEITYQALYKETCEELFTQGD
FIPDGEEANNKQFLTYYLTTEGGNKLRRVLCVIKHLNPDITYCPLLEPII
SILLHYFDEEDTFSVVSGLLSGSFSAPFMDQTKIENVTTDATLQDLFLKV
NKKGFNRLNSFFKPEESTKNKVALFPAWRMCIFENLDFVSLTRLLDCLFA
EGVKMLFRVGLYILQTFYDYSLTFQQLHCSTPHDLVATIGQYAESVTFSA
EDLLKNATKINITTKQVIKMKQENNKLYKAQKLEWSERTIIKQVVAVDLR
QVSDIIKPNQWQELNEWLPARVQIMQPFMLFTTNKDGYNLKTLYQLCEDE
EQTLVIIQTSNNEIFGAYLSASLQQRHDGRANMSYFGTGETFLFKLAPAP
KAYHWDESLHQDDQKANIAPRMRKKSHYVFVDTIPLIKDIDDRDTSKKKT
TDAKLKKRKTSMKRRISKKLNFTSSSSSSTSSKPGFDRSVSRSAYSNRGK
EVSVSIHPLSAINIKRSTYSVPKHLFLGNKSSNYQKLNNIPENKSAPDSL
KDYSDSGSNNKRGKLMSAQTIDLGEVKKLHKSSNVVIEDDEEDLDGGLQM
HKTRSQTTSTTTTGGARPKLLTKTSIIEEEDEEGESNPSTGEYVKVKTVS
LFISCDDIRIIVGGGNGEGLWMDGELAKGRSTKCDTFKNEPLTTNESGDF
SITRVDVFGFQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038248XLOC_038248Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060920TCONS_00060920Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR006571TLDc_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 60..275
e-value: 2.5E-4
score: 11.4
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 117..267
e-value: 1.4E-16
score: 60.8
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 63..252
score: 11.496
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 47..175
IPR006571TLDc domainSMARTSM00584109ultracoord: 353..761
e-value: 3.5E-38
score: 142.9
IPR006571TLDc domainPFAMPF07534TLDcoord: 380..458
e-value: 1.6E-13
score: 50.9
coord: 700..761
e-value: 7.6E-9
score: 35.8
NoneNo IPR availableGENE3D1.10.8.270coord: 32..171
e-value: 1.2E-6
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..552

Blast
[Close]
BLAST of TCONS_00060920-protein vs. Swiss-Prot (Human)
Match: TBC24 (TBC1 domain family member 24 OS=Homo sapiens GN=TBC1D24 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 9.949e-42
Identity = 102/365 (27.95%), Postives = 182/365 (49.86%), Query Frame = 0 
Query:  102 IPDGEEANNKQFLTYYLTTEGGNKLRRVLCVIKHLNPDITYCPLLEPIISILLHY-FDEEDTFSVVSGLLSGSFSAP-FMDQTKIENVTTDATLQDLFLKVNKKGFNRLNSFFKPEESTKNKVALFPAWRMCIFENLDFVSLTRLLDCLFAEGVKMLFRVGLYILQTFYDYSLTFQQLHCSTPHDLVATIGQYAESVTFSAEDLLKNATKINITTKQVIKMKQENNKLYKAQK--------LEWSERTIIKQVV-AVDLRQVSDIIKPNQWQELNEWLPARVQIMQPFMLFTTNKDGYNLKTLYQLCEDEEQTLVIIQTSNNEIFGAYLSASLQQRHDGRANMSYFGTGETFLFKLAPAPKAYHW 455
            +P  E  +N Q  +Y L   G   +R++L  + +  PDI++CP L  ++++LLHY  DE + F     +L+ +      +DQ+ +   ++  T  DL  K  +     + +       +++ + ++  W+  +F  L      R+ D    EG K+L+RV L IL+ F+           S   D+   +   A++V  S E LL+ A  I + +++ I++ Q  N+    QK        +  S+R  +   V A + R  S+I+   + +++  W+P R  + QP +LF++ + GY+L   Y  CE  E TL++I+T+  E+ GAYLS    +R+     + +FGTGE F+F+L P  + Y W
Sbjct:   90 LPLPEFVDNTQVPSYCLNARGEGAVRKILLCLANQFPDISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAV------SEDVLQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPLESDSVKQDIRTFVRDIAKTV--SPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQKGITVKQKSVSLSKRQFVHLAVHAENFR--SEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHEPTLLLIKTTQKEVCGAYLSTDWSERNKFGGKLGFFGTGECFVFRLQPEVQRYEW 444
The following BLAST results are available for this feature:
BLAST of TCONS_00060920-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC249.949e-4227.95TBC1 domain family member 24 OS=Homo sapiens GN=TB... [more]
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