TCONS_00060663-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060663-protein
Unique NameTCONS_00060663-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length436

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060663-protein ID=TCONS_00060663-protein|Name=TCONS_00060663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp
SIAASLDEHIGVGSESSNYIHLFMSYDQESSQAANHALALIGNTENDHLF
GSSESTTPVQQASSETTSPVENINIAKFIPPIQKVAESTTTDLSTVDLKQ
AILATAKRKDEVEQQNRALHTSLEEHRELVQTLRNDLEHLETTSKEREEN
DSKKINDLNREVDVLKNQLKKYVAAVQMLGKDSSTGDGPVTADDITSASP
LKAREPRERERANSEHDSIFEEKLVQMAELHGELMEFQENLQRQLASKVI
YISKLKHELVALRGPLPDEIHLPEQDNNTENRPGRPLINIWIPSVFEGGK
GTDSHHVYQIYIRIGDDEFNIYKRYSQFNKLHLEMCKKYPKIQEKLNFPK
KKVFGKKASKLVEERRKKLQEYLRVLINAELSSNEALSTNPNRNLLISSI
PFFSETNDKKQGKKKSIKERSSSPVYTGLTSFPEIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038146XLOC_038146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060663TCONS_00060663Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..175
NoneNo IPR availableGENE3D1.20.120.330coord: 82..266
e-value: 5.2E-4
score: 19.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..216
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 286..398
e-value: 2.3E-5
score: 33.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 300..382
e-value: 1.1E-14
score: 54.3
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 286..426
e-value: 6.9E-23
score: 80.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 286..410
score: 14.848
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 286..381

Blast
[Close]
BLAST of TCONS_00060663-protein vs. Swiss-Prot (Human)
Match: SNX29 (Sorting nexin-29 OS=Homo sapiens GN=SNX29 PE=1 SV=3)

HSP 1 Score: 249.98 bits (637), Expect = 5.701e-75
Identity = 145/376 (38.56%), Postives = 217/376 (57.71%), Query Frame = 0 
Query:   37 ALALIGNTEN-----DHLFGSSESTTPVQQASSETTSPVENINIAKFIPPIQKVAESTTTDLSTVDLKQAILATAKRKDEVEQQNRALHTSLEEHRELVQTLRNDLEHLETTSKEREENDSKKINDLNREVDVLKNQLKKYVAAVQMLGKDSSTGDGP--VTADDITSASPLKAREPRERERANSEHDSIFEEKLVQMAELHGELMEFQENLQRQLASKVIYISKLKHELVALRGPLPDEIHLPEQDNNTENR--PGRPLINIWIPSVFEGGKGTDSHHVYQIYIRIGDDEFNIYKRYSQFNKLHLEMCKKYPKIQEKLNFPKKKVFGKKASKLVEERRKKLQEYLRVLINAELSSNEALSTNPNRNLLISSIPFF 403
            A A +G+ EN     DH+        P  + S E +SP     ++  +P     + S    ++  +L+QA +A   RKDE+E++NR+L   L+   E    LR +++ L+    E+EE    K+  L RE +VLK QLKKYV AVQML ++  T + P   + D   + +  K  E  E      E  S +E KL+++AE+HGEL+EF E L R L +K   +S+++ EL+ LRGP+P ++    +D +  +     R LIN+WIPSVF  GK  ++ HVYQ+YIRI DDE+NIY+RY++F  LH ++  KYP+++   NFP KK  G K +K VEERRK+LQ YLR ++N  +      + +P +  LI  +PFF
Sbjct:  414 ADAPLGSLENGTGPEDHVL-----PDPGLRYSVEASSPGHGSPLSSLLP-----SASVPESMTISELRQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQALARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAE------ELASSYERKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVR-AYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMPFF 772
The following BLAST results are available for this feature:
BLAST of TCONS_00060663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX295.701e-7538.56Sorting nexin-29 OS=Homo sapiens GN=SNX29 PE=1 SV=... [more]
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