TCONS_00060630-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060630-protein
Unique NameTCONS_00060630-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060630-protein ID=TCONS_00060630-protein|Name=TCONS_00060630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MSSEQCAHRLQELMRIPGNSQCADCGTEEPEPNFVSLNLGLFICIKCSGH
HRALGTRFSVTKSILLDTFDDAKVKQMEAGGNMLGVEKWQVNVPKCWPIV
DKHSPDDLIEQWIRAKYERQEFTENQVTEELRPYCVGSKYGFLMKKKKKD
SKWQRRFFVLSAEEGYLKMYIKQGDNEPKHKISISGINLMMVHSDVTGEK
HSMLITFPIMQNNQSKQRHIYVYADKSFEIVDWYLTIRGARLKFLTPYLY
EVERPVVDFLQSRKFIKSGYLHKTGGKDGDSWRKRYVCVDFHRFLYFEKA
LDSEPIGEVSIEKAGMECFVMEGIDGNHPQSPSEHCFMVRAHENSSLKGR
KPTYNFCAASREDLNIWMNAFRKGMEDLNFLSAVKETDKRQSLMSNFSRT
SSYAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038134XLOC_038134Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060630TCONS_00060630Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP
IPR001849PH_domain
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005096 GTPase activator activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 19..38
score: 32.41
coord: 61..82
score: 31.97
coord: 40..57
score: 52.11
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 7..130
e-value: 3.0E-26
score: 103.2
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 9..125
e-value: 1.2E-29
score: 102.6
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 7..130
score: 21.597
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 137..244
e-value: 4.7E-7
score: 39.4
coord: 265..378
e-value: 6.2E-16
score: 68.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 139..238
e-value: 2.5E-10
score: 40.7
coord: 266..375
e-value: 3.3E-15
score: 56.4
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 264..376
score: 12.825
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 136..242
score: 10.714
IPR011993PH domain-likeGENE3D2.30.29.30coord: 128..246
e-value: 5.2E-15
score: 54.6
IPR011993PH domain-likeGENE3D2.30.29.30coord: 251..380
e-value: 4.4E-19
score: 68.1
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 138..240
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 264..375
NoneNo IPR availableSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 9..124

Blast
[Close]
BLAST of TCONS_00060630-protein vs. Swiss-Prot (Human)
Match: ADAP1 (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.186e-56
Identity = 120/368 (32.61%), Postives = 192/368 (52.17%), Query Frame = 0 
Query:   12 ELMRIPGNSQCADCGTEEPEPNFVSLNLGLFICIKCSGHHRALGTRFSVTKSILLDTFDDAKVKQMEAGGNMLGVEKWQVNVPKCWPIVDKHSPDD---LIEQWIRAKYERQEFTENQVTEELRPYCVGSKYGFLMKKKKKDSKWQRRFFVLSAEEGYLKMYIKQGDNEPKHKISISGINLMMVHSDVTGEKHSMLITFPIMQNNQSKQRHIYVYADKSFEIVDWYLTIRGARLKFLTPYLYEVERPVVDFLQSRKFIKSGYLHKTGGKDGDSWRKRYVCVDFHRFLYFEKALDSEPIGEVSIEKAGMECFVMEGIDGNHPQSPSEHCFMVRAHENSSLKGRKPTYNFCAASREDLNIWMNAFRKGME 376
            EL++ PGN++CADCG   P+P++ S  LG+FIC+ CSG HR +  + S  KS+ LD +++A+V+ M + GN     +++  VP  +    + +P D   L EQWIRAKYERQEF      E+  PY  G + GFL K+ + + ++  R FVL+  EG LK + +    EPK  + I  +N     + + G  H + +T+  +++N +  R+I++Y +   EIVDW+  +R AR  +L           +    SR ++K GY+ KTG K  + +RKR+  +D  R +YF+  LD+   GEV I        V+ G   +       H   +   +   L        F   +  D   W+ AF+K ++
Sbjct:   11 ELLQRPGNARCADCGA--PDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFY---YRPTPSDCQLLREQWIRAKYERQEFI---YPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKI-GHPHGLQVTY--LKDNST--RNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFL--------FACETESDQREWVAAFQKAVD 356
The following BLAST results are available for this feature:
BLAST of TCONS_00060630-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAP11.186e-5632.61Arf-GAP with dual PH domain-containing protein 1 O... [more]
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