TCONS_00060535-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060535-protein
Unique NameTCONS_00060535-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length473

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060535-protein ID=TCONS_00060535-protein|Name=TCONS_00060535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
PPLKVDQAALLKEMKYNINFKKKVNTNFKLETLQGVGRSIHVKIIYQCFN
ATAGSQGQCDEEKFETFLQGVHQEGCQCMTVPSNEDDWNKEICSGAEYFG
CSNASLHQEAIRVNLTTFLSPKVCIRVCQTMGYAEAVIGGDNGCYCQNSG
LEFGRSYVSEEKCLSACRYEPDFSCGKSSYKHLYTTGMMGPLESSDGLCS
KSACVNGTYCVRMFDTEFCVCNQTSSAKPEECYGCLNGWTAIIGQPNCYF
ITDLQPLLKYQLQQYCQSIYGRVAVPHDFQAVTQFMRLILRNFVENRSHH
QIEADIKEIIKNGDDFLARGFPLCERPKTEVTGRYPWTKWPKGTYGLPMS
RTGCPVQNHFEWRAGSYVQDTENDNSANEVSRDLHLHGNINKGNITSHYC
IKTDPVGNTSWPDGRYCIYRKGGKCPDNMVPSAIFWDDEDTNNRNKADGV
HPDGMFKADTIIQFCCMDRPLNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038076XLOC_038076Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060535TCONS_00060535Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016186C-type_lectin-like/link
IPR002889WSC_carb-bd
IPR031569ApeC
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 229..448
e-value: 0.0011
score: 18.3
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 98..176
e-value: 4.7E-5
score: 23.4
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 95..187
score: 8.321
IPR031569Apextrin, C-terminal domainPFAMPF16977ApeCcoord: 340..468
e-value: 3.4E-41
score: 141.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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