TCONS_00060435-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060435-protein
Unique NameTCONS_00060435-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060435-protein ID=TCONS_00060435-protein|Name=TCONS_00060435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=143bp
HTGPYKGEMMMSVQWYYKPTQTISKGNDIICGDEMEVFASRHKDDNSVAC
IIDRCYVITLPQYNRYKAHKQRWEEKRNRKLVVVPEVKNHRSRLLPSPDF
DPSLVYFCRFGYDYRSGKLIKIFRSANFKSNCLGSDKSKNGQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038004XLOC_038004Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060435TCONS_00060435Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001025BAH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003682 chromatin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 8..114
e-value: 2.4E-7
score: 30.5
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 1..123
score: 11.713

Blast
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BLAST of TCONS_00060435-protein vs. Swiss-Prot (Human)
Match: BAHD1 (Bromo adjacent homology domain-containing 1 protein OS=Homo sapiens GN=BAHD1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 4.102e-24
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 0 
Query:    4 PYKGEMMMSVQWYYKPTQTISKGNDIICGDEM--EVFASRHKDDNSVACIIDRCYVITLPQYNRYKAH-KQRWEEKRNRKLVVVPEVKNHRS---RLLPSPDFDPSLVYFCRFGYDYRSGKLIK 121
            P  GE+MMS+ WYY+P + +  G      + +  EVFASRH+D NSVACI ++CYV+T  +Y R+ A  K+R E   +RK  +VP   ++ +   R +P  D DP LV+ CR  YD+R G+++K
Sbjct:  656 PESGELMMSLLWYYRP-EHLQGGRSPSMHEPLQNEVFASRHQDQNSVACIEEKCYVLTFAEYCRFCAMAKRRGEGLPSRKTALVPPSADYSTPPHRTVPE-DTDPELVFLCRHVYDFRHGRILK 777
The following BLAST results are available for this feature:
BLAST of TCONS_00060435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BAHD14.102e-2442.74Bromo adjacent homology domain-containing 1 protei... [more]
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