TCONS_00060231-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060231-protein
Unique NameTCONS_00060231-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length476

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060231-protein ID=TCONS_00060231-protein|Name=TCONS_00060231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
MALFEVAVKQVAKSSGSATLHPVPDLNSANHFKNLCLVKRKTSLWFWKKP
KMVATQIRLNDLFEEDLKVPKPKSSIIMEDFTETPTLKVNGSIGTKIAKE
LNLNLSGSDTMTMTIKLGDIVKNECDWESLQEALEKQRIKTNHPLLKETK
KSKRSTLCVVLESLVTKGEGELSKDTDIEVKTDDTGDMESKKVSIISVDV
TGKGDVERKHTNSFKIPPATVLAYSCNEFSIDSSGMATLHSAVDVNDTSG
DPLFTLNGGDSDPVDAVRVEFQPLVKCDKFERIRIELKMLLEKNPDNDLI
GSMHLLLAAAEFKIENKSEEKTLSTSTLTKLFQEGEDAQFNAILQHLGFA
LPETWDEGSVITFPDAQYELIKSVISLLDALMDIEANVRTLLGNLSQTDT
KSILNIVLNEIQGKENSMDDRGPIKKFFTATPSAQLLLKEAGFVEMKIDD
EDLLCFTKSKLFHLMDLYSVLYVFSH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037892XLOC_037892Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060231TCONS_00060231Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007677Gasdermin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007677GasderminPFAMPF04598Gasdermincoord: 4..242
e-value: 5.9E-31
score: 107.9

Blast
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BLAST of TCONS_00060231-protein vs. Swiss-Prot (Human)
Match: PJVK (Pejvakin OS=Homo sapiens GN=DFNB59 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.083e-19
Identity = 47/178 (26.40%), Postives = 94/178 (52.81%), Query Frame = 0 
Query:    3 LFEVAVKQVAKSSG-SATLHPVPDLNSANHFKNLCLVKRKTSLWFWKKPKMVATQIRLNDLFEEDLKVPKPKSSIIMEDFTETPTLKVNGSIGTKIAKELNLNLSGSDTMTMTIKLGDIVKNECDWESLQEALEKQRIKTNHPLLKETKKSKRSTLCVVLESLVTKGEGELSKDTDIE 179
            +F  A K   K  G    L PVP L+ A+ ++ L LV +K   + + + K  +T   L D+   D ++    SS  + ++ +   + + G  G  I  ++ +N++GSD++ +    G + K+E +  +L + +  ++I  +H L+++++ S+++ LCVV+ES+ T  +  LS    I 
Sbjct:    1 MFAAATKSFVKQVGDGGRLVPVPSLSEADKYQPLSLVVKKKRCFLFPRYKFTSTPFTLKDILLGDREISAGISSYQLLNYEDESDVSLYGRRGNHIVNDVGINVAGSDSIAVKASFGIVTKHEVEVSTLLKEITTRKINFDHSLIRQSRSSRKAVLCVVMESIRTTRQCSLSVHAGIR 178
The following BLAST results are available for this feature:
BLAST of TCONS_00060231-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PJVK4.083e-1926.40Pejvakin OS=Homo sapiens GN=DFNB59 PE=1 SV=1[more]
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