TCONS_00059397-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059397-protein
Unique Name	TCONS_00059397-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	984

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059397-protein ID=TCONS_00059397-protein|Name=TCONS_00059397-protein|organism=Clytia hemisphaerica|type=polypeptide|length=984bp
MLRGDFGRVVVRVIRQAKHPPPGTTCCHHQSTHPQRLQRYQHLRQYHQNF
FLITTKPLHRCYPGFPGHHQNLLKAHQRFSTPTYQQRRHLMILRILRAAT
KIRYIFLGAAGTAGVGAKLTYNKWRDKWLELQEQVPQLGWISQYYPNEFI
DELQQNFNKGNEQMLEGLEAMKKLFFGVAGDVAETVQPPIVNASFFTSNE
ADDQEGKASAGAGDDDDSDLLTSEEQKLRELLTRAQQELLEMQHKFQKEL
DKLEHENRELRKEILMDKSKGHTHHRKVKKTVIDMYSDVLDLLSEYDNNY
DIQDHLPRVVVIGDQSAGKTSVLEMIARARIFPRGSGQMMTRCPIMVTLT
EGPRHVASFKGTNQEYDLSKEHELKELRNEVEERMTAKLRRGQTITQEVL
SMHVKGPGLPRMVLVDLPGIISTETSEMATNTKESIMNVSRHYMSNPNAI
ILCIQDGSIDAERSIVTDLASQMDPSGKRTIFVMTKVDLAERNKIDQNRI
KKILGGRLFPMKAMGYYAVVTGTGNTNESIDHIKQYEEDFFRQSELFKSG
ILKTSQMTTQNLSFAVANCFWQMVRESIEQQYDTFKAKKFNLETEWKNNY
PTLRELDRDELFDKARGEILDEVLSLSQTSPQDWEQILSKNLWESVKEHA
IENIYLPAAQIGNPREFKTKVDILLKEWADRVLPHYAVKIGFDTLLTEFS
DAMEQGIEIGGKKDAHKTLFEELKQTVFKECTQNHSWQTLAKESLRVIQR
TALEDSNVPSKEQWDEAIKFMEESLQFESEKSENVLNKLIGPGWKERWMY
WSSRSSDQSFNNEVKKELDRLLQSTQETHHPELAEDEITAVKRNLQTQNI
EVSPNEIVRVWKSLYRSYFIERALQGVQECRKAYYHRDVAKTELECNDLI
LFWRFRRMLQSTSNSLRQQIINTEARRLENEVKEILDDIGQNQDLKKDLL
NGRQVDLAEELKRVRHIQESLEQFVEALKREKST

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037393	XLOC_037393	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059397	TCONS_00059397	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022812	Dynamin_SF
IPR001401	Dynamin_GTPase
IPR030381	G_DYNAMIN_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 218..270
None	No IPR available	COILS	Coil	Coil	coord: 918..945
None	No IPR available	COILS	Coil	Coil	coord: 575..595
None	No IPR available	GENE3D	3.40.50.300		coord: 287..605 e-value: 1.1E-41 score: 142.6
None	No IPR available	GENE3D	3.40.50.300		coord: 35..286 e-value: 0.078 score: 11.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..219
None	No IPR available	CDD	cd08771	DLP_1	coord: 305..579 e-value: 6.21891E-79 score: 258.714
IPR022812	Dynamin superfamily	PRINTS	PR00195	DYNAMIN	coord: 306..324 score: 70.03 coord: 331..348 score: 30.5 coord: 406..423 score: 40.36 coord: 475..491 score: 55.1
IPR022812	Dynamin superfamily	PFAM	PF00350	Dynamin_N	coord: 309..487 e-value: 5.0E-37 score: 127.4
IPR001401	Dynamin, GTPase domain	SMART	SM00053	dynamin_3	coord: 283..530 e-value: 1.9E-10 score: 37.6
IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	PROSITE	PS51718	G_DYNAMIN_2	coord: 303..579 score: 62.123
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 285..579

Blast

[Close]

BLAST of TCONS_00059397-protein vs. Swiss-Prot (Human)
Match: OPA1 (Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1 PE=1 SV=3)

HSP 1 Score: 947.192 bits (2447), Expect = 0.000e+0
Identity = 489/962 (50.83%), Postives = 672/962 (69.85%), Query Frame = 0

Query:   29 HQSTHPQ-RLQRYQHLRQYHQNFFLITTKPLHRCYPGFPGHHQNLLKAHQRFSTPTY--QQRRHLMILRILRAATKIRYIFLGAAGTAGVGAKLTYNKWRDKWLELQEQ---VPQLGWISQYYPNEFIDELQQNFNKGNEQMLEGLEAMKKLFFGVAGDVAETVQPPIVNASFFTSNEADDQEGKASAGAGDDDDSDLLTSEEQKLRELLTRAQQELLEMQHKFQKELDKLEHENRELRKEILMDKSKGHTHHRKVKKTVIDMYSDVLDLLSEYDNNYDIQDHLPRVVVIGDQSAGKTSVLEMIARARIFPRGSGQMMTRCPIMVTLTEGPRHVASFKGTNQEYDLSKEHELKELRNEVEERMTAKLRRGQTITQEVLSMHVKGPGLPRMVLVDLPGIISTETSEMATNTKESIMNVSRHYMSNPNAIILCIQDGSIDAERSIVTDLASQMDPSGKRTIFVMTKVDLAERNKIDQNRIKKILGGRLFPMKAMGYYAVVTGTGNTNESIDHIKQYEEDFFRQSELFKSGILKTSQMTTQNLSFAVANCFWQMVRESIEQQYDTFKAKKFNLETEWKNNYPTLRELDRDELFDKARGEILDEVLSLSQTSPQDWEQILSKNLWESVKEHAIENIYLPAAQIGNPREFKTKVDILLKEWADRVLPHYAVKIGFDTLLTEFSDAMEQGIEIGGKKDAHKTLFEELKQTVFKECTQNHSWQTLAKESLRVIQRTALEDSNVPSKEQWDEAIKFMEESLQFESEKSENVLNKLIGPGWKERWMYWSSRSSDQSFNNEVKKELDRLLQSTQETHHPELAEDEITAVKRNLQTQNIEVSPNEIVRVWKSLYRSYFIERALQGVQECRKA--YYHRDVAKTELECNDLILFWRFRRMLQSTSNSLRQQIINTEARRLENEVKEILDDIGQNQDLKKDLLNGRQVDLAEELKRVRHIQESLEQFVEALKREK 982
            + S HP  +LQR Q LR   Q F  +T  PL +                 +FS   Y  Q RR+    R+     K+RY+ LG+A   G  AK T+++W+D   +L E    VP + W      +E+ID     F K  + +    + +K     +A D  + V+   +   FFTS   ++   +A+    + D      S+++K+ +L    Q+ELL  Q K+Q+ L++LE EN+ELRK +L    KG  HHRK+KK++IDMYS+VLD+LS+YD +Y+ QDHLPRVVV+GDQSAGKTSVLEMIA+ARIFPRGSG+MMTR P+ VTL+EGP HVA FK +++E+DL+KE +L  LR+E+E RM   ++ G T++ E +S++VKGPGL RMVLVDLPG+I+T TS MA +TKE+I ++S+ YM NPNAIILCIQDGS+DAERSIVTDL SQMDP G+RTIFV+TKVDLAE+N    +RI++I+ G+LFPMKA+GY+AVVTG GN++ESI+ I++YEE+FF+ S+L K+ +LK  Q+TT+NLS AV++CFW+MVRES+EQQ D+FKA +FNLETEWKNNYP LRELDR+ELF+KA+ EILDEV+SLSQ +P+ WE+IL ++LWE V  H IENIYLPAAQ  N   F T VDI LK+W D+ LP+ AV++ ++TL  EFS  M    E  GK+  H  +F++LK+ V +E  + H W   A++SLRVIQ  ALED ++  K+QWD AI FMEE+LQ   + +EN +  ++GP WK+RW+YW +R+ +Q  +NE K EL+++L+  +E H   LA DEIT V++NL+++ +EV P+ I   W  +YR +F++ AL     CR+   YY R    +ELECND++LFWR +RML  T+N+LRQQ+ NTE RRLE  VKE+L+D  ++ + K  LL G++V LAE+LK+VR IQE L+ F+EAL +EK
Sbjct:   41 YHSHHPTLKLQRPQ-LRTSFQQFSSLTNLPLRKL----------------KFSPIKYGYQPRRNFWPARLATRLLKLRYLILGSAVGGGYTAKKTFDQWKDMIPDLSEYKWIVPDIVW----EIDEYID-----FEKIRKALPSSEDLVK-----LAPDFDKIVESLSLLKDFFTSGSPEETAFRATDRGSESDKHFRKVSDKEKIDQL----QEELLHTQLKYQRILERLEKENKELRKLVLQKDDKG-IHHRKLKKSLIDMYSEVLDVLSDYDASYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKEEDLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQQIIEGKLFPMKALGYFAVVTGKGNSSESIEAIREYEEEFFQNSKLLKTSMLKAHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFEKAKNEILDEVISLSQVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFM---TEPKGKE--HDDIFDKLKEAVKEESIKRHKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQARLKDTENAIENMVGPDWKKRWLYWKNRTQEQCVHNETKNELEKMLKCNEE-HPAYLASDEITTVRKNLESRGVEVDPSLIKDTWHQVYRRHFLKTALNHCNLCRRGFYYYQRHFVDSELECNDVVLFWRIQRMLAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKKIKLLTGKRVQLAEDLKKVREIQEKLDAFIEALHQEK 960

The following BLAST results are available for this feature:

BLAST of TCONS_00059397-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059397-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OPA1	0.000e+0	50.83	Dynamin-like 120 kDa protein, mitochondrial OS=Hom...	[more]

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TCONS_00059397-protein (polypeptide) - C. hemisphaerica