TCONS_00059344-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059344-protein
Unique NameTCONS_00059344-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059344-protein ID=TCONS_00059344-protein|Name=TCONS_00059344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MATLAAGPVRQAVIKKLTEALKPAHLDVINESFMHNVPAGSETHFKVIVV
SDAFSKKPLIQRHRLVNETLKEELASGVHALSIQAKTPEQWESNPKISES
PNCMGGSKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037359XLOC_037359Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059344TCONS_00059344Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002634BolA
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002634BolA proteinPFAMPF01722BolAcoord: 17..90
e-value: 3.6E-32
score: 110.4
IPR002634BolA proteinPIRSFPIRSF003113BolAcoord: 2..105
e-value: 6.4E-38
score: 127.5
IPR002634BolA proteinSUPERFAMILY82657BolA-likecoord: 6..93
NoneNo IPR availableGENE3D3.30.300.90coord: 4..97
e-value: 2.8E-30
score: 103.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..109

Blast
[Close]
BLAST of TCONS_00059344-protein vs. Swiss-Prot (Human)
Match: BOLA1 (BolA-like protein 1 OS=Homo sapiens GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.276e-34
Identity = 57/105 (54.29%), Postives = 70/105 (66.67%), Query Frame = 0 
Query:    5 AAGPVRQAVIKKLTEALKPAHLDVINESFMHNVPAGSETHFKVIVVSDAFSKKPLIQRHRLVNETLKEELASGVHALSIQAKTPEQWESNPKISESPNCMGGSKR 109
            A GPV  A+  KL EAL P  L++ NES  H VP GSETHF+V VVS  F     +QRHRLV+  L EEL   VHAL+IQA+TP QW  N ++  SP C+GG+K+
Sbjct:   28 AIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQLDTSPPCLGGNKK 132
The following BLAST results are available for this feature:
BLAST of TCONS_00059344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BOLA15.276e-3454.29BolA-like protein 1 OS=Homo sapiens GN=BOLA1 PE=1 ... [more]
back to top