TCONS_00059228-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059228-protein
Unique NameTCONS_00059228-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length553

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059228-protein ID=TCONS_00059228-protein|Name=TCONS_00059228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=553bp
MRLELISLLLSNLFTLCNSYTFMDKNKSFLQYKQWNMDQTGTLSFKFKTL
NTYGLILYSDTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKL
GSNLNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGL
FFGGLPQKIDNIVDGSWELEPSRLVGCIEEVKYKSGANETFTEGELLASD
EVKPGCMNACQENVCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEADIIS
FDGNTRLEINVPPSLRSTTNNQIALRFKTRESNGLIMAAWSKNDHLMIEL
KNTIIQLSIDLGGGYHVFRVNDQSFSDGLWHLIEITRKGRDVYLVVDRKY
FMDRSTSGQFSKFDLREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYF
NELNIIYKVLHTTNQAYYLNGTKITNCSVTKAKKIVVRGNKDNKISESAK
PSEEKSPTASSNSKVSKKHVDDESKTLSKNSVTWIVVGLVCGTLVLIVTV
IVIVHNVKHRYSGVFLSSHVKEQYQKQLTPDGAGTLLFQPRNGGRIVIEP
HLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037301XLOC_037301Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059228TCONS_00059228Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR000742EGF-like_dom
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 39..186
e-value: 9.8E-21
score: 84.9
coord: 269..403
e-value: 4.3E-31
score: 119.3
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 277..402
e-value: 3.2E-25
score: 89.1
coord: 47..184
e-value: 4.0E-16
score: 59.6
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 248..427
score: 37.86
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 19..206
score: 30.987
IPR000742EGF-like domainSMARTSM00181egf_5coord: 209..243
e-value: 0.0064
score: 25.7
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 207..243
score: 14.352
NoneNo IPR availableGENE3D2.60.120.200coord: 235..430
e-value: 1.5E-40
score: 138.4
NoneNo IPR availableGENE3D2.60.120.200coord: 12..190
e-value: 2.2E-23
score: 82.6
NoneNo IPR availableGENE3D2.10.25.10coord: 207..234
e-value: 1.2E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..472
NoneNo IPR availableCDDcd00110LamGcoord: 19..183
e-value: 3.24415E-20
score: 86.7032
NoneNo IPR availableCDDcd00110LamGcoord: 249..401
e-value: 7.92644E-33
score: 121.756
NoneNo IPR availableCDDcd00054EGF_CAcoord: 208..243
e-value: 6.64131E-7
score: 45.7054
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 221..232
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 19..206
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 222..430

Blast
BLAST of TCONS_00059228-protein vs. Swiss-Prot (Human)
Match: NRX1A (Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.383e-41
Identity = 116/439 (26.42%), Postives = 209/439 (47.61%), Query Frame = 0
Query:    5 LISLLLSNLFTLCNSYTFMDKNKSFLQYKQWNMDQTGTLSFKFKTLNTYGLILYS--------DTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSNLNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQKIDNIVDGS--W-ELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVKPGC----MNACQENVCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEADIISFDGNTRLEINVPPSLRSTTNNQIALRFKTRESNGLIMAAWSKN--DHLMIELKNTIIQLSIDLGGGYHVFRVNDQS------------FSDGLWHLIEITRKGRDVYLVVDRKYFMDRSTSGQFSKFD--------LREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYFNELNII 406
            +++    N+ TL +  TF +  +SF+   +WN  +TG++SF F+T    GLIL+S        D          + A++++ G L + + MG+   +    +K    +ND EW+ V+ QRD     ++   L +   +    GE + + L+  L+ GGLP+    +V  +  W  L     VGCI ++     + +     E+ ++  VKP C       C  N C N G C + +  Y CDC GTG+ G SC++EA ++S+DG+  ++I +P  +  T    ++LRF+++ + G++MA  S++  D L +EL    ++L+++L       R+N  S             +D  WH + + R+G+ + L VD +  M    +G  ++ +        + E+ Y+   P             +NF G +Q + FN +  I
Sbjct:  468 VVAFKCENVATL-DPITF-ETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLK---KVNDGEWYHVDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMH-TEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNL----DCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVP-------------SNFIGHLQSLTFNGMAYI 880          

HSP 2 Score: 110.153 bits (274), Expect = 5.058e-25
Identity = 108/424 (25.47%), Postives = 179/424 (42.22%), Query Frame = 0
Query:   22 FMDKNKSFLQYKQWNMDQTGTLSFKFKTLNTYGLILYSDTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSNLNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQKIDN-----IVDGSWELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVK-PGCMNACQEN------VCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEAD----------------------IISFDGNTRLEINVPPSLRSTTNNQIALRFKTRESNGLIMAAWSKNDHLMIELKNTIIQLSIDLGGGYH---VFRVNDQSFSDGLWHLIEITRKGRD--------VYLVVDRKYFMDRSTSGQFSKFDLREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYF 400
            F      + ++ +WN      +SF+ KT +  GL+LY D     ++ E  +      G+L+++  +   +  +   +   + +ND  WH+V I+R    R  T      EA+ +    +   M + SGLF GGLP ++        +    E EP +  G I +V+  S        GE+   DE    G  + C+        VC NGG C     +  CDC  TGF G  C +E +                      I +F G+     ++  +   +++++I L FKT + NGL++      D++ + LKN  + L I+LG G     V  VN + F+D  WH +++TR  R         V + VD        T   ++     +  Y+GG P    L    S    NF GC+++V +
Sbjct:   33 FPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRG---GRLQLSFSIFCAEPAT---LLADTPVNDGAWHSVRIRRQ--FRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFK--GWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGK-FNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL--PGSPVSNNFMGCLKEVVY 443          

HSP 3 Score: 108.612 bits (270), Expect = 1.320e-24
Identity = 95/379 (25.07%), Postives = 171/379 (45.12%), Query Frame = 0
Query:   43 LSFKFKTLNTYGLILYSDTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSN--LNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQK----IDNIVDGSWELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVKPGC---MNACQENVCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEADIISFD-GNTRLEINVPPSLR-STTNNQIALRFKTRESNGLIMAAWSKN---DHLMIELKNTIIQLSIDLGGGYHVFRVNDQSFSDGLWHLIEITRKGRDVYLVVDRKYFMDRSTSG-QFSKFDLREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYFNELNII 406
            L F+FKT +  GLILY+     S     +I ++L+ G L     +G         +K  SN  LND +WH V I RD  +     V++D++  +    G  + + L S L+ GG+ ++    +  +V      +     GC+  V       +  ++  L  + +++ GC      CQE+ C N G C+  +  + CDC  T F+GP C        F  G  ++    PP+ R ST  +++A+ F T +   +++   S +   D+L + +    I +  ++G        ++   +DG +H++  TR G +  L VD    ++R  +G Q + F+ +  + IGG              G  F+G +  +Y+N L ++
Sbjct:  929 LFFQFKTTSLDGLILYN-----SGDGNDFIVVELVKGYLHYVFDLG----NGANLIKGSSNKPLNDNQWHNVMISRDTSNLHT--VKIDTKITTQITAGARN-LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQ-----GCLASVDLNGRLPDLISDA-LFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGK-----------EQGQPFQGQLSGLYYNGLKVL 1278          
The following BLAST results are available for this feature:
BLAST of TCONS_00059228-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRX1A4.383e-4126.42Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1[more]
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