Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00059228-protein ID=TCONS_00059228-protein|Name=TCONS_00059228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=553bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00059228-protein vs. Swiss-Prot (Human)
Match: NRX1A (Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.383e-41 Identity = 116/439 (26.42%), Postives = 209/439 (47.61%), Query Frame = 0 Query: 5 LISLLLSNLFTLCNSYTFMDKNKSFLQYKQWNMDQTGTLSFKFKTLNTYGLILYS--------DTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSNLNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQKIDNIVDGS--W-ELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVKPGC----MNACQENVCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEADIISFDGNTRLEINVPPSLRSTTNNQIALRFKTRESNGLIMAAWSKN--DHLMIELKNTIIQLSIDLGGGYHVFRVNDQS------------FSDGLWHLIEITRKGRDVYLVVDRKYFMDRSTSGQFSKFD--------LREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYFNELNII 406 +++ N+ TL + TF + +SF+ +WN +TG++SF F+T GLIL+S D + A++++ G L + + MG+ + +K +ND EW+ V+ QRD ++ L + + GE + + L+ L+ GGLP+ +V + W L VGCI ++ + + E+ ++ VKP C C N C N G C + + Y CDC GTG+ G SC++EA ++S+DG+ ++I +P + T ++LRF+++ + G++MA S++ D L +EL ++L+++L R+N S +D WH + + R+G+ + L VD + M +G ++ + + E+ Y+ P +NF G +Q + FN + I Sbjct: 468 VVAFKCENVATL-DPITF-ETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLK---KVNDGEWYHVDFQRDGRSGTISVNTLRTPYTA---PGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMH-TEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNL----DCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVP-------------SNFIGHLQSLTFNGMAYI 880 HSP 2 Score: 110.153 bits (274), Expect = 5.058e-25 Identity = 108/424 (25.47%), Postives = 179/424 (42.22%), Query Frame = 0 Query: 22 FMDKNKSFLQYKQWNMDQTGTLSFKFKTLNTYGLILYSDTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSNLNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQKIDN-----IVDGSWELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVK-PGCMNACQEN------VCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEAD----------------------IISFDGNTRLEINVPPSLRSTTNNQIALRFKTRESNGLIMAAWSKNDHLMIELKNTIIQLSIDLGGGYH---VFRVNDQSFSDGLWHLIEITRKGRD--------VYLVVDRKYFMDRSTSGQFSKFDLREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYF 400 F + ++ +WN +SF+ KT + GL+LY D ++ E + G+L+++ + + + + + +ND WH+V I+R R T EA+ + + M + SGLF GGLP ++ + E EP + G I +V+ S GE+ DE G + C+ VC NGG C + CDC TGF G C +E + I +F G+ ++ + +++++I L FKT + NGL++ D++ + LKN + L I+LG G V VN + F+D WH +++TR R V + VD T ++ + Y+GG P L S NF GC+++V + Sbjct: 33 FPGAEGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRG---GRLQLSFSIFCAEPAT---LLADTPVNDGAWHSVRIRRQ--FRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFK--GWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGK-FNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADL--PGSPVSNNFMGCLKEVVY 443 HSP 3 Score: 108.612 bits (270), Expect = 1.320e-24 Identity = 95/379 (25.07%), Postives = 171/379 (45.12%), Query Frame = 0 Query: 43 LSFKFKTLNTYGLILYSDTSETSEYTESYIAMKLIYGQLEVTIQMGADDYRSNRRVKLGSN--LNDLEWHTVEIQRDADHRQVTHVRLDSEAQSLFNDGEHDRMFLNSGLFFGGLPQK----IDNIVDGSWELEPSRLVGCIEEVKYKSGANETFTEGELLASDEVKPGC---MNACQENVCPNGGKCINYFTEYRCDCIGTGFTGPSCQKEADIISFD-GNTRLEINVPPSLR-STTNNQIALRFKTRESNGLIMAAWSKN---DHLMIELKNTIIQLSIDLGGGYHVFRVNDQSFSDGLWHLIEITRKGRDVYLVVDRKYFMDRSTSG-QFSKFDLREKLYIGGHPDVKGLGDINSNSGTNFKGCIQQVYFNELNII 406 L F+FKT + GLILY+ S +I ++L+ G L +G +K SN LND +WH V I RD + V++D++ + G + + L S L+ GG+ ++ + +V + GC+ V + ++ L + +++ GC CQE+ C N G C+ + + CDC T F+GP C F G ++ PP+ R ST +++A+ F T + +++ S + D+L + + I + ++G ++ +DG +H++ TR G + L VD ++R +G Q + F+ + + IGG G F+G + +Y+N L ++ Sbjct: 929 LFFQFKTTSLDGLILYN-----SGDGNDFIVVELVKGYLHYVFDLG----NGANLIKGSSNKPLNDNQWHNVMISRDTSNLHT--VKIDTKITTQITAGARN-LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQ-----GCLASVDLNGRLPDLISDA-LFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGK-----------EQGQPFQGQLSGLYYNGLKVL 1278 The following BLAST results are available for this feature:
BLAST of TCONS_00059228-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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