TCONS_00059195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059195-protein
Unique NameTCONS_00059195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059195-protein ID=TCONS_00059195-protein|Name=TCONS_00059195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MAARPKGYGLTAEVRGKIDGKYDGELAQQAMQFIEHYVPDSNVSGNSTSD
AVAEKLKDGVVLCKLINAIEPGSIKKFNESKMAFKQMENIGKFLDAIDQY
GVAKSDSFQTVDLYEKQNMPAVINAIHALGRKAQGKGRYGIGPKESQANK
REFXLKGVMVSAQKSRKPTNGNLLKSKCVLVQMLSDFKWVPIKERLRLVK
TLVKLDLSWIKLVIYLAMNKFICHFLHL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037278XLOC_037278Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059195TCONS_00059195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 52..67
score: 54.04
coord: 85..101
score: 54.67
coord: 22..35
score: 33.19
coord: 122..136
score: 35.69
coord: 3..17
score: 43.53
coord: 101..116
score: 51.47
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..129
e-value: 5.2E-21
score: 85.8
IPR001715Calponin homology domainPFAMPF00307CHcoord: 47..134
e-value: 5.8E-20
score: 71.4
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 22..175
e-value: 7.8E-30
score: 103.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..133
score: 14.183
IPR001715Calponin homology domainCDDcd00014CHcoord: 52..134
e-value: 1.3847E-21
score: 85.4403
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 17..152

Blast
[Close]
BLAST of TCONS_00059195-protein vs. Swiss-Prot (Human)
Match: CNN1 (Calponin-1 OS=Homo sapiens GN=CNN1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.904e-28
Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 0 
Query:    4 RPKGYGLTAEVRGKIDGKYDGELAQQAMQFIEHYVPDSNVSGNSTSDAVAEKLKDGVVLCKLINAIEPGSIKKFNESKMAFKQMENIGKFLDAIDQYGVAKSDSFQTVDLYEKQNMPAVINAIHALGRKAQGKG-RYGIGPKESQANKREF 153
            R   YGL+AEV+ K+  KYD +  Q+  ++IE       V+G    +   + LKDG++LC+ IN ++PGS+KK NES   + Q+ENIG F+ AI +YGV   D F+  DL+E  N   V + + AL   A+ KG +  +G K ++  +R+F
Sbjct:    8 RGPAYGLSAEVKNKLAQKYDHQREQELREWIE------GVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKF 152
The following BLAST results are available for this feature:
BLAST of TCONS_00059195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNN11.904e-2839.07Calponin-1 OS=Homo sapiens GN=CNN1 PE=1 SV=2[more]
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