TCONS_00059073-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059073-protein
Unique NameTCONS_00059073-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length469

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059073-protein ID=TCONS_00059073-protein|Name=TCONS_00059073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MVQITEDLIRKRSEHNDCEITTLEEISLHQCDIERLEYIGKWCRDLKILY
LQSNLIPKIENIHQLKKLEYLNLALNNILVIENLKGCESLKKLDLTVNFV
GKITSIESLKGNEFLRDMYLTGNPCTEYVGYRDYVIATLPQLTSLDGTPV
SKSERIKANQKLTELRCDMLRQEKIYMAKQDKEQEIEEIETNGVKKEKMT
EEEFWSKPSKFTPQSRVEAHHFMEEKRKEKEETKKTDFPDLRNSLQRTIR
FFTDDGRPLNINQDKIDFEFQENDDFTGYVLDVACYKHLDTSLIDVDLQP
HYVRVTMKGKILQLSLNEEISPDKSTAQRSQTSGHLLINMPKLKYILEGR
CSGSRRPKTDSKGAKMGSNEFPDATKTRETKTIGCESGKTNTDDLQKSVE
RLEVTENENKIDYTNIVKEENEKSKDLNSFIFNGKKRKGGSPMKNNKNAI
SENQYDEHFVDDLDVPPLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037202XLOC_037202Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059073TCONS_00059073Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003603U2A'_phosphoprotein32A_C
IPR032675L_dom-like
IPR008978HSP20-like_chaperone
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 65..86
e-value: 48.0
score: 10.0
coord: 43..64
e-value: 0.046
score: 22.9
NoneNo IPR availablePFAMPF14580LRR_9coord: 1..171
e-value: 1.4E-13
score: 50.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..392
IPR003603U2A'/phosphoprotein 32 family A, C-terminalSMARTSM00446LRRcap_2coord: 128..146
e-value: 0.0022
score: 27.2
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..204
e-value: 1.0E-24
score: 85.9
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 19..153
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 258..345
e-value: 1.5E-4
score: 21.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 67..88
score: 8.066
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 22..43
score: 4.932
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 89..110
score: 7.181
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 45..66
score: 8.189

Blast
[Close]
BLAST of TCONS_00059073-protein vs. Swiss-Prot (Human)
Match: TILB (Protein tilB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3)

HSP 1 Score: 340.502 bits (872), Expect = 6.952e-113
Identity = 217/514 (42.22%), Postives = 299/514 (58.17%), Query Frame = 0 
Query:    1 MVQITEDLIRKRSEHNDCEITTLEEISLHQCDIERLEYIGKWCRDLKILYLQSNLIPKIENIHQLKKLEYLNLALNNILVIENLKGCESLKKLDLTVNFVGKITSIESLKGNEFLRDMYLTGNPCTEYVGYRDYVIATLPQLTSLDGTPVSKSERIKANQKLTELRCDMLRQEKIYMAK--------QDKEQE------------------------IEEIETNGVKKEKMTEE-------------EFWSKPSKFTPQSRVEAHHFMEEKRKEKEETKKTDFPDLRNSLQRTIRFFTDDGRPLNINQDKIDFEFQENDDFTGYVLDVACYKHLDTSLIDVDLQPHYVRVTMKGKILQLSLNEEISPDKSTAQRSQTSGHLLINMPKLKYILEGRCSGSRRPKTDSKGAKMGSNEFPDATKTRETKTIGCESGKTNTDDLQKSVERLEVTENENKI-DYTNIVKEENEKSKDLNSFIFNGKKRKGGSPMKNNKNAISENQYDEHFVDDLDVPPL 468
            M  ITEDLIR+ +EHNDC I +LEE+SLHQ +IERLE+I KWCRDLKILYLQ+NLI KIEN+ +LKKLEYLNLALNNI  IENL+GCE L KLDLTVNF+G+++SI++L+ N  L++++L GNPC  +  YR++V+ATLPQL  LDG  +  SERIKA Q  + +   +  QEK +  K        Q K QE                        +  +E+    +   TEE             EFW+KP  FTP+SR+E    ME++RK++E+  +      +    RT+   T+DG+ LN+N+ KIDF  ++N+     +LD+A Y+++DTSLIDVD+QP YVRV +KGK  QL L  E+ PD S+A+RSQT+GHL+I MPK+  ++ G   G R      K  K  S+   + T TR                  K +E+LEV  +++   D TNIV+E                  K  +P +  +  I  ++ D  F D+ +VPPL
Sbjct:    1 MGWITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNIEKIENLEGCEELAKLDLTVNFIGELSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSERIKALQDYSVIEPQIREQEKDHCLKRAKLKEEAQRKHQEEDKNEDKRSNAGFDGRWYTDINATLSSLESKDHLQAPDTEEHNTKKLDNSEDDLEFWNKPCLFTPESRLETLRHMEKQRKKQEKLSEK---KKKVKPPRTL--ITEDGKALNVNEPKIDFSLKDNE--KQIILDLAVYRYMDTSLIDVDVQPTYVRVMIKGKPFQLVLPAEVKPDSSSAKRSQTTGHLVICMPKVGEVITG---GQRA----FKSMKTTSDRSREQTNTR-----------------SKHMEKLEVDPSKHSFPDVTNIVQE------------------KKHTPRRRPEPKIIPSEEDPTFEDNPEVPPL 465
The following BLAST results are available for this feature:
BLAST of TCONS_00059073-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TILB6.952e-11342.22Protein tilB homolog OS=Homo sapiens GN=LRRC6 PE=1... [more]
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