TCONS_00058531-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058531-protein
Unique NameTCONS_00058531-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length554

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058531-protein ID=TCONS_00058531-protein|Name=TCONS_00058531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=554bp
MIFLCLYICGLFVTSITGTDSIEIVRGVSLQEQSFYDPAKDFTCLDGSKT
IPFDSVNDDYCDCVDGSDEPGTSACPEGKFYCQNLGHIAKYIQSSRVNDG
ICDCCDGSDEYDSSAACFNRCDEEGREERNRRQEELEEHNAGYEVKKTYI
QMGADKKIEKKTRSDTLNQLLEERRAKLEELKTIKEAAEAPEKEAKDKHE
DEWNEIQRVKKEEQEAKDKLEAFKKLDLDSNGWVQISELMASPYLNSDMS
EEDAKDLLGGEALVDGEGFDKVFSPAIKDRYLPDGRPKPTEDGQEDAQEG
GSELPKDEGDDGSRPSATDESQEPTEEELKIRQTFAELDNTDSESHGDDD
DDDDDDLDNDPDLRESGDGHPDNHVTSSSSSTTKPEDKMPDYDEATRALI
ANADKARLEYDEADKEVRELESEQSTLNTYLGLDFGKEDEFAALKGDCFE
FTDREYIYKLCPFDRVTQRQKSGGSETDLGRWGNWEDGYNAMKYTGGTGC
WNGPARSTLVKLSCGRENHLLSSVEPSRCEYEMEFKTPAMCTQAGANGYR
HTEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036870XLOC_036870Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058531TCONS_00058531Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028146PRKCSH_N
IPR009011Man6P_isomerase_rcpt-bd_dom
IPR018247EF_Hand_1_Ca_BS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..188
NoneNo IPR availableCOILSCoilCoilcoord: 196..226
NoneNo IPR availableCOILSCoilCoilcoord: 396..423
NoneNo IPR availableGENE3D1.10.287.370coord: 124..423
e-value: 0.0028
score: 17.1
NoneNo IPR availableGENE3D4.10.400.10coord: 73..123
e-value: 4.9E-10
score: 38.6
NoneNo IPR availableGENE3D4.10.400.10coord: 36..72
e-value: 2.3E-5
score: 24.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..390
NoneNo IPR availableCDDcd00112LDLacoord: 75..110
e-value: 0.00543208
score: 34.1046
IPR028146Glucosidase II beta subunit, N-terminalPFAMPF12999PRKCSH-likecoord: 12..176
e-value: 8.0E-45
score: 152.7
IPR009011Mannose-6-phosphate receptor binding domainPFAMPF13015PRKCSH_1coord: 409..543
e-value: 1.7E-28
score: 99.2
IPR009011Mannose-6-phosphate receptor binding domainGENE3D2.70.130.10coord: 424..545
e-value: 5.9E-21
score: 75.1
IPR009011Mannose-6-phosphate receptor binding domainSUPERFAMILY50911Mannose 6-phosphate receptor domaincoord: 450..541
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 227..239

Blast
[Close]
BLAST of TCONS_00058531-protein vs. Swiss-Prot (Human)
Match: GLU2B (Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 9.736e-73
Identity = 129/274 (47.08%), Postives = 174/274 (63.50%), Query Frame = 0 
Query:   26 RGVSLQEQSFYDPAKDFTCLDGSKTIPFDSVNDDYCDCVDGSDEPGTSACPEGKFYCQNLGHIAKYIQSSRVNDGICDCCDGSDEYDSSAACFNRCDEEGREERNRRQEELEEHNAGYEVKKTYIQMGADKKIEKKTRSDTLNQLLEERRAKLEELKTIKEAAEAPEKEAKDKHEDEWNEIQRVKKEEQEAKDKLEAFKKLDLDSNGWVQISELMASPYLNSD----MSEEDAKDLLGGEALVDGEGF-DKVFSPAIKDRY----LPDGRPKPT 290
            RGVSL    FYD +K FTCLDGS TIPFD VNDDYCDC DGSDEPGT+ACP G F+C N G+   YI S+RVNDG+CDCCDG+DEY+S   C N C E+GR+ER   Q+  E    G+ +KK  I+     + EK+ +   L    +    ++E L+T+KE AE PE+EAK++H+  W E     K +QE +   +AFK+LD D +G V ++EL   P L++D    +SE +A+ LL G+   D   F D+V++ AI+D+Y    LP   P P+
Sbjct:   21 RGVSLTNHHFYDESKPFTCLDGSATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYIPSNRVNDGVCDCCDGTDEYNSGVICENTCKEKGRKERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADAFKELDDDMDGTVSVTELQTHPELDTDGDGALSEAEAQALLSGDTQTDATSFYDRVWA-AIRDKYRSEALPTDLPAPS 293
The following BLAST results are available for this feature:
BLAST of TCONS_00058531-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLU2B9.736e-7347.08Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKC... [more]
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