TCONS_00058197-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058197-protein
Unique NameTCONS_00058197-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length401

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058197-protein ID=TCONS_00058197-protein|Name=TCONS_00058197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MFSTEPPSSAIRVFNTQSIDRDTRLFPLTLRKTSDSSMLLENGAGKSTDY
FYSLYQKAKKTIQEKEEQVEISNELSSIPSLSPKLVKKETTTNLSRSTSL
SSTETGSSSHRSLSPPKSDSPLVAMNIIGSATPRPSSPPELSSINLDDYS
ESRLSGDPKFLDFIRSTSTLSARSSPRIEQPTPPDSPRSAPIFPFNPHSP
SRLAVLDSPQHHTTEPSHRLRRFDSLHRSITSTFHSKQESTNVDSLHRPQ
ECLTGNCKYLFPSERCHVCRPDEFLYQRAFYSSEFLLRQKEKWRRPRTVY
TEKQLVSLEKAYKKNKYLRGEERKALCKTLSLEERHIKVWYQNRRAKERG
QIRHDKWLQRSKRHQLLMAQQQKQKLKQKEKQERLKPNDEETEAGLTQQD
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036673XLOC_036673Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058197TCONS_00058197Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableGENE3D1.10.10.60coord: 281..352
e-value: 9.3E-19
score: 66.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..149
NoneNo IPR availableCDDcd00086homeodomaincoord: 294..351
e-value: 1.79008E-14
score: 66.8832
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 293..355
e-value: 3.3E-17
score: 73.2
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 294..349
e-value: 1.8E-18
score: 66.0
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 291..351
score: 18.301
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 280..349

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058197-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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