TCONS_00057803-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057803-protein
Unique NameTCONS_00057803-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057803-protein ID=TCONS_00057803-protein|Name=TCONS_00057803-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MSDIIEIKIEEDVIETEGNEFPQTLSLTLKEGIVVCDRVQSIPMVKIECN
DGTESNEKTPGLKYREQSKNDAFKKFKCSKCFISLKRKRDLIKHRQMVHC
RIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLE
EHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQ
LIHTDSDSPCMDDLPDHTHENLKAFICKTFKSKKKLKKDVDRVHKKIRPH
MCDECGKGFTMQYEVKKHQDAVHKGIKPLARHQRTVHEGIKAFECQECAE
SFGQKTTLTFHQRTVHE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036433XLOC_036433Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057803TCONS_00057803Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 105..128
e-value: 0.02
score: 24.0
coord: 134..157
e-value: 0.0012
score: 28.1
coord: 250..273
e-value: 0.12
score: 21.5
coord: 293..316
e-value: 0.056
score: 22.6
coord: 181..203
e-value: 0.011
score: 25.0
coord: 76..99
e-value: 0.25
score: 20.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 295..316
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 136..157
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 183..203
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 252..273
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 107..128
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 76..104
score: 9.078
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 181..208
score: 13.443
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 250..278
score: 13.609
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 105..133
score: 13.152
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..162
score: 12.799
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 293..317
score: 12.923
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 124..155
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 279..316
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 177..205
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 74..124
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 242..278
NoneNo IPR availableGENE3D3.30.160.60coord: 29..88
e-value: 0.012
score: 15.5
NoneNo IPR availableGENE3D3.30.160.60coord: 116..142
e-value: 1.1E-13
score: 50.8
coord: 236..259
e-value: 2.0E-8
score: 34.0
coord: 89..115
e-value: 1.9E-9
score: 37.2
coord: 283..316
e-value: 1.2E-8
score: 34.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 134..157
e-value: 3.5E-4
score: 20.8
coord: 76..99
e-value: 0.02
score: 15.2
coord: 105..128
e-value: 0.0014
score: 18.9
coord: 181..203
e-value: 0.0084
score: 16.4
coord: 250..273
e-value: 0.0055
score: 17.0
NoneNo IPR availableGENE3D3.30.160.60coord: 143..165
e-value: 8.6E-5
score: 22.0
coord: 193..235
e-value: 1.0E-5
score: 24.9
coord: 260..282
e-value: 2.5E-6
score: 26.9
NoneNo IPR availableGENE3D3.30.160.60coord: 166..192
e-value: 1.2E-7
score: 31.2

Blast
BLAST of TCONS_00057803-protein vs. Swiss-Prot (Human)
Match: ZN160 (Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 7.296e-32
Identity = 89/296 (30.07%), Postives = 140/296 (47.30%), Query Frame = 0
Query:   70 NDAFKKFKCSKCFISLKRKRDLIKHRQMVHCRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKR---------------SLHGAANHITTKKTALSIEKKIK-----------------------HKHFECQKCGKSFACKRSLMKHQLIHTDSDSPCMDDLPDHTHENLKAFICKTFKSKKKLKKDVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKP---------------LARHQRTVHEGIKAFECQECAESFGQKTTLTFHQ 312
            N   K +KC++C  +  +  +L  HR+ +H   K +KC ECGK FT+R  L +H+  +H  +K ++C ECG+ F H +YL  H+R               +  G +N +TT +   + EK  K                        K ++C +CGK+F+ + SL  HQ IHT        + P   +E  K F   ++  + +      RVH   +P+ C+ECGK F+M   +  HQ  +H G KP               LA H+R +H G K ++C EC ++F  +++LT HQ
Sbjct:  251 NSCGKPYKCNECGKAFTQNSNLTSHRR-IHSGEKPYKCSECGKTFTVRSNLTIHQ-VIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFRGHSN-LTTHQLIHTGEKPFKCNECGKLFTQNSHLISHWRIHTGEKPYKCNECGKAFSVRSSLAIHQTIHT-------GEKPYKCNECGKVFRYNSYLGRHR------RVHTGEKPYKCNECGKAFSMHSNLATHQ-VIHTGTKPFKCNECSKVFTQNSQLANHRR-IHTGEKPYKCNECGKAFSVRSSLTTHQ 528          

HSP 2 Score: 121.709 bits (304), Expect = 1.343e-30
Identity = 84/264 (31.82%), Postives = 129/264 (48.86%), Query Frame = 0
Query:   74 KKFKCSKCFISLKRKRDLIKHRQMVHCRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAAN----------HITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTDSDSPCMDDLPDHTHENLKAFICKTFKSKKKLKKDVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKP---------------LARHQRTVHEGIKAFECQECAESFGQKTTLTFHQ 312
            K FKC++C     +   L  HR+ +H   K +KC ECGK F++R  L  H+  +H+ +K ++C ECG++FT K++L  H R +H                 T + A         K ++C  CG++F+ + SL  HQ IHT        + P   HE  K F   ++ +  +      R+H   +P+ C+ECGK F+M   +  H+  +H G KP               LA HQRT H G K + C EC ++F  +++LT HQ
Sbjct:  479 KPFKCNECSKVFTQNSQLANHRR-IHTGEKPYKCNECGKAFSVRSSLTTHQ-AIHSGEKPYKCIECGKSFTQKSHLRSH-RGIHSGEKPYKCNECGKVFAQTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTG-------EKPYKCHECGKVFRHNSYLATHR------RIHTGEKPYKCNECGKAFSMHSNLTTHK-VIHTGEKPYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSLTTHQ 724          

HSP 3 Score: 119.783 bits (299), Expect = 4.736e-30
Identity = 84/270 (31.11%), Postives = 129/270 (47.78%), Query Frame = 0
Query:   74 KKFKCSKCFISLKRKRDLIKHRQMVHCRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTDSD----SPCM------DDLPDH--THENLKAFIC----KTFKSKKKLKKDVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKP---------------LARHQRTVHEGIKAFECQECAESFGQKTTLTFHQ 312
            K FKC++C     +   LI H + +H   K +KC ECGK F++R  L +H+  +H  +K ++C ECG+ F + +YL  H+R   G                    K ++C +CGK+F+   +L  HQ+IHT +     + C         L +H   H   K + C    K F  +  L      +H   +P+ C ECGK FT +  ++ H+  +H G KP               LARH R VH G K ++C +C  +F  +++LTFHQ
Sbjct:  367 KPFKCNECGKLFTQNSHLISHWR-IHTGEKPYKCNECGKAFSVRSSLAIHQT-IHTGEKPYKCNECGKVFRYNSYLGRHRRVHTGE-------------------KPYKCNECGKAFSMHSNLATHQVIHTGTKPFKCNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSLTTH-QAIHSGEKPYKCIECGKSFTQKSHLRSHR-GIHSGEKPYKCNECGKVFAQTSQLARHWR-VHTGEKPYKCNDCGRAFSDRSSLTFHQ 612          

HSP 4 Score: 107.842 bits (268), Expect = 6.224e-26
Identity = 76/257 (29.57%), Postives = 120/257 (46.69%), Query Frame = 0
Query:   74 KKFKCSKCFISLKRKRDLIKHRQMVHCRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTDSDSPCMDDLPDHTHENLKAFIC----KTFKSKKKLKKDVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKP---------------LARHQRTVHEGIKAFECQECAESFGQKTTLTFH 311
            K +KC++C     +   L +H + VH   K +KC +CG+ F+ R  L  H+  +H  +K ++C ECG+ F H +YL  H+R   G                    K ++C +CGK+F+   +L  H++IHT                  K + C    K F     L  +  R H   +P+ C+ECGK F+++  +  HQ A+H G KP               LA H+R +H G K + C EC ++F  +++LT H
Sbjct:  563 KPYKCNECGKVFAQTSQLARHWR-VHTGEKPYKCNDCGRAFSDRSSLTFHQ-AIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGE-------------------KPYKCNECGKAFSMHSNLTTHKVIHTGE----------------KPYKCNQCGKVFTQNSHL-ANHQRTHTGEKPYRCNECGKAFSVRSSLTTHQ-AIHTGKKPYKCNECGKVFTQNAHLANHRR-IHTGEKPYRCTECGKAFRVRSSLTTH 779          

HSP 5 Score: 83.5741 bits (205), Expect = 1.134e-17
Identity = 67/247 (27.13%), Postives = 108/247 (43.72%), Query Frame = 0
Query:   49 CNDGTESNEKTPGLKYREQSKNDAFKKFKCSKCFISLKRKRDLIKHRQMVHCRIKLFKCKECGKCFTLRVKLNVHRNRVHNQKKSFRCQECGETFTHKTYLEEHKRSLHGAANHITTKKTALSIEKKIKHKHFECQKCGKSFACKRSLMKHQLIHTDSDSPCMDD----------LPDH--THENLKAFIC----KTFKSKKKLKKDVDRVHKKIRPHMCDECGKGFTMQYEVKKHQDAVHKGIKPL 279
            CND   +      L +  Q+ +   K +KC +C    +    L  HR+ +H   K +KC ECGK F++   L  H+  +H  +K ++C +CG+ FT  ++L  H+R+  G                    K + C +CGK+F+ + SL  HQ IHT       ++          L +H   H   K + C    K F+ +  L   +  +H   + + C+ECGK F     +  H   +H G KP 
Sbjct:  595 CNDCGRAFSDRSSLTF-HQAIHTGEKPYKCHECGKVFRHNSYLATHRR-IHTGEKPYKCNECGKAFSMHSNLTTHK-VIHTGEKPYKCNQCGKVFTQNSHLANHQRTHTGE-------------------KPYRCNECGKAFSVRSSLTTHQAIHTGKKPYKCNECGKVFTQNAHLANHRRIHTGEKPYRCTECGKAFRVRSSLTTHMA-IHTGEKRYKCNECGKVFRQSSNLASHHR-MHTGEKPY 817          
The following BLAST results are available for this feature:
BLAST of TCONS_00057803-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1607.296e-3230.07Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 ... [more]
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