TCONS_00057658-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00057658-protein
Unique Name	TCONS_00057658-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	510

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00057658-protein ID=TCONS_00057658-protein|Name=TCONS_00057658-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MWNAIFIRKIFHALEVFMFIFLIVVNVSFIFRRSTESDDKIPSSFPSESS
QNTSSAVSHVWIDKQSSNPVADGDFMKISKDWMKSKQVVKSLKEPGFAGI
NDMEKYFKSNNLKLGQKRTGKAFVVFGIPTVKRSKAYYVIQTVSSLLKHM
KTSERKNVVIVIFVADLDEGFLRKVVKDVRENFPVEVKDGIIQVVAPDKA
YYPKNLDNLPRLFGDKQDRVRWRSKQCLDYSYLYYYCKDMAQYFVQLEDD
IIAVDDFMQKMRQFITKNDKLRWSVLELGARGFIGMTYRGEHLESLAKFV
RYFFWTMPVDLLFRVYNDIYLYKNPKNFRIKKPVFLHVGKFSSLNGQVRK
LEDLKDIPIVGRRQFQSVKGNPVAEIESDLSGFYKSNVLENPYSSKGVMW
ATKPKDGDTLTIMFNSPQKIKRIFISSGMDGHEKDSFYETKLYISQMKGN
TNSKCGKFELVKFYKEAIVDITFDEPKENVRCVKLELTAVQKTKGIPNWL
IIEEIAILDS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036366	XLOC_036366	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00057658	TCONS_00057658	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like
IPR006759	Glyco_transf_54

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016758	transferase activity, transferring hexosyl groups

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008979	Galactose-binding domain-like	GENE3D	2.60.120.260		coord: 366..510 e-value: 1.6E-6 score: 27.4
IPR006759	Glycosyl transferase family 54	PFAM	PF04666	Glyco_transf_54	coord: 109..353 e-value: 2.1E-67 score: 227.0

Blast

[Close]

BLAST of TCONS_00057658-protein vs. Swiss-Prot (Human)
Match: MGT4B (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.047e-59
Identity = 135/426 (31.69%), Postives = 217/426 (50.94%), Query Frame = 0

Query:  112 LKLGQKRTGKAFVVFGIPTVKRSKAYYVIQTVSSLLKHMKTSERKNVVIVIFVADLDEGFLRKVVKDVRENFPVEVKDGIIQVVAPDKAYYPKNLDNLPRLFGDKQDRVRWRSKQCLDYSYLYYYCKDMAQYFVQLEDDIIAVDDFMQKMRQFITKNDKLRWSVLELGARGFIGMTYRGEHLESLAKFVRYFFWTMPVDLLF------RVYND----IYLYKNPKNFRIK-KP-VFLHVGKFSSLNGQVRKLEDLKDIPIVGRRQFQSVKGNPVAEIESDLSGFYKSNVLENPYSSKGVMWATKPKDGDTLTIMFNSPQKIKRIFISSGMDGHEKDSFYETKLYI-----------SQMKGNT------NSKCGKFELVKFYK---EAIVDITFDEPKENVRCVKLELTAVQKTKGIPNWLIIEEI 505
            +++GQ RTG + VV GIP+V+R    Y+  T+ SL+  +   E+++ VIV+ +A+ D  +   V ++++  FP E+  G+++V++P   +YP +   L   FGD ++RVRWR+KQ LDY +L  Y +    Y+VQLEDDI+A  +++  M+ F  +     W +LE    GFIG  ++   L  + +F+  F+   P+D L       +V N      +  +   N RI+ KP +F HVG  SSL G+++KL+D KD    G++  +    NP AE+ + L   Y+   LE  Y  +   WA  P  GD +   F  P +++R F  SG   H +D  + T + +           +  +G T       S  G  ++  FYK   E  VD  F  P E +R       ++Q     P W+I+ EI
Sbjct:  133 VRVGQGRTGVS-VVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYP-DFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKD-KDF---GKQALRKEHVNPPAEVSTSLKT-YQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFG-PLEALRL------SIQTDS--PVWVILSEI 542

The following BLAST results are available for this feature:

BLAST of TCONS_00057658-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00057658-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MGT4B	2.047e-59	31.69	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu...	[more]

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TCONS_00057658-protein (polypeptide) - C. hemisphaerica