TCONS_00057577-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00057577-protein
Unique NameTCONS_00057577-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00057577-protein ID=TCONS_00057577-protein|Name=TCONS_00057577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MSFFGFGQSAEISIELSDSDKRKQVELKNEDDRREKHFLFYDGETVAGTV
NIKLKNPGKKLEHYGIKVEFIGQIELFYDRGNHHEFTSLVKELVKPGEMT
TNGSYKFEFVNVEKPYESYTGKDVRLRYFLRVTIVRRLSDITKEVDIAVH
TLSSYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRI
KIRHMELAIIKRETAGTGPNSSPDNETIAKYEIMDGAPVRGESIPIRLFL
SGYELTPTMRDINKKFSVRYFLNLVLVDEEERRYFKQQEITLWRKGDIPK
RTGMSGLETFQKPGTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036306XLOC_036306Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00057577TCONS_00057577Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028934Vps26-related
IPR014756Ig_E-set
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028934Vacuolar protein sorting protein 26 relatedPFAMPF03643Vps26coord: 6..281
e-value: 1.5E-130
score: 434.1
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 39..160

Blast
[Close]
BLAST of TCONS_00057577-protein vs. Swiss-Prot (Human)
Match: VP26B (Vacuolar protein sorting-associated protein 26B OS=Homo sapiens GN=VPS26B PE=1 SV=2)

HSP 1 Score: 499.59 bits (1285), Expect = 9.924e-180
Identity = 232/302 (76.82%), Postives = 273/302 (90.40%), Query Frame = 0 
Query:    1 MSFFGFGQSAEISIELSDSDKRKQVELKNEDDRREKHFLFYDGETVAGTVNIKLKNPGKKLEHYGIKVEFIGQIELFYDRGNHHEFTSLVKELVKPGEMTTNGSYKFEFVNVEKPYESYTGKDVRLRYFLRVTIVRRLSDITKEVDIAVHTLSSYPEMNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIRHMELAIIKRETAGTGPNSSPDNETIAKYEIMDGAPVRGESIPIRLFLSGYELTPTMRDINKKFSVRYFLNLVLVDEEERRYFKQQEITLWRKGDIPKRT 302
            MSFFGFGQS E+ I L+D++ RK+ E K ED ++EK+FLFYDGETV+G V++ LKNP K+LEH GIK+EFIGQIEL+YDRGNHHEF SLVK+L +PGE+T + ++ FEF +VEKPYESYTG++V+LRYFLR TI RRL+D+ KE+DI VHTLS+YPE+N+SIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKI+HME+ IIKRET GTGPN   +N+TIAKYEIMDGAPVRGESIPIRLFL+GYELTPTMRDINKKFSVRY+LNLVL+DEEERRYFKQQE+ LWRKGDI +++
Sbjct:    1 MSFFGFGQSVEVEILLNDAESRKRAEHKTEDGKKEKYFLFYDGETVSGKVSLALKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKS 302
The following BLAST results are available for this feature:
BLAST of TCONS_00057577-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VP26B9.924e-18076.82Vacuolar protein sorting-associated protein 26B OS... [more]
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