Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00057570-protein ID=TCONS_00057570-protein|Name=TCONS_00057570-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1464bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00057570-protein vs. Swiss-Prot (Human)
Match: NU160 (Nuclear pore complex protein Nup160 OS=Homo sapiens GN=NUP160 PE=1 SV=3) HSP 1 Score: 588.186 bits (1515), Expect = 0.000e+0 Identity = 421/1421 (29.63%), Postives = 692/1421 (48.70%), Query Frame = 0 Query: 70 FEEKGGGFHFSKCSKL---SANRRISWRYFDNIIELEEISDDYNLFNNKVQITVSEEFLLPN-VVIKENGEELLVFLATTSSVHTLSFQHPNHQKYGFIIPQGMDVSLPSLFHNINNNLNHTQHELSEPC-FQF--------------DVSLSKGGNVNYGLVTEANTLLSVEL----VEGEECNITELKETSLAQRLWTGFVPSFVRGESANWMGAESVVMESLEDEAYAFTICKDLKIRVWSITTQTCILTKDLVEHIPDKLDSQPNMVGTLSLKKSEKDSSDSQFKLAAHCCLLYGSQFLVMECFKEESNLVMV-HVSNFFSDHTNVQDFVITNHHLWSCWKNEDEHQLCYAPIEGGREFERGWHDVHLKASQKEELFIGIFQDAKEAYLKKIFTPNFASSETILKALQVYVKTIDSGHEFIPANDCNLPTLKESIVAVLDLEVERNTLNRELEVAELQEINAHCWSRFYSIILQCLQSRDAPLGLHINETDGKAYIIRKECEGMCSELPWVDHLYQSDLTRCEAIQGYVEMQLDTAGDSINEDIVLLFDCLKSIPEQFNGDVILGIDKDLDGNEDVKTFLSSMASCLITNTSDFEQLVGDSVERGDYYLYLEGRLKNIKDIKRAVDFILNALDVVDPATGDESEIE-SSGLSGEQN-------QQIFCSKLGVKLVTNLLLTTAESRMHLCRDLYVLLKFMSTMAGKVGIDLSDAREFESLTSSTCYELLRSYHTIVWAATNPMTTIDPNVVDNNITNLAALRLTERSPASKTARKIDETVNTDEESILSHFVHDVG-------LLSAVKKYRSPHRSSIQDVMNFIKNSCLNQLWVLNDKSSDFPEYLAAHGQYALLNEYLHFCDEWCLVNRGTKDFLLAQSYLGTDQPHKALKYFISAARGISLREPLLMNILEDENCSSKHHALVQYFIKVMRLFEHYNFPSFVISAASSALTIAKKDEPNIPMLWSVIFKYHLELQHHNEAYAAIVHNPDKARRENCLRHFIITLCDRGLFHEICTYPYVNLQEEVVSIIESRARTMDMTVNRFYDLLYSFHTIKSDYRKAATTMFEQACRLQVEMHGLKSLQKQAKCYLASITALQLVDSKYAWIVRPEEKISQQPSPVPGKAGSNVNEYSQSPKRREDGEQIFYSTMKKRRNVRTVIVELNDLEKEYLLVLARLKLVQHGKNETVAIGPGLSASETIGLLSQLGLFDMSFSVALKFNLPLKGIFEALASKCANLMKYKPSEFDERWNWLTLNEINSIQLVTSKSATQQALHLLQSYLKKFSKQNSSLHLKVVASKFLSINCELPSWLIKDYKTANPAELLHLYICYDMVSEATELSLGYIDAVLGHGKEQFGLNTALHATTPPVWLPYTAFDQILKPLRSNQDNPELATLLQRLETKLEEYFNQLEITSCD 1451 + E GGF++ + KL + NR I W+ + +EL E S D NL NN +++ +LP V + E +++ + T +VH L HP+ ++ +D + S+F +I + + ++PC +Q LS G + L + + ++L + G ++ ELK++S+ QRL TG++P+ +RG+ + S+ + +E +A+ F +C+D K+R+WS Q C++ D++E++P K D + L+ + + + H QF + + ESN + H+S+ F+ + DF +T+ +W+ W ++ E+Q I W+ V ++ +EE+ I QD +E YL+ +FTP ++E + KALQ++ + + D + LK+ + ++ E++ + E E + + W +FY+ LQ ++ PL LH+N +++K VDHLY L E + E + D I D++ L CL+ I E D+ + ++ + + + +IT D E ++ D + +L+ I++ A+ ++ +D E+E+E G + Q Q++ S +V + A +R +CRDL +L + + + V + + LL SY+ I W + T + + +++N+ +L+ L LT+ S A R + + ++I+ F +V L S K S + +++ I + L LW N F E L + QY L +Y+ WC VN G+ F+L + YL T + KAL+ F AA + +E L ++ E+ +QY+ KV+RL + P VI A+SA+T A D + L + IFK+HL+L H+++AY A+ PD +R+ +CLR ++ LC+R ++ +PYVNL EVV IIESRAR +D+ + +Y+LLY+FH + +YRKA T MFE RL E+ L+ L+KQ CYLA++ L+L+ +YAWIV+P +G+ + SPKR DGE T N + I+EL DLEKE L RL L QH + VA+ SA E + LL Q GLFD + S+ F LPL +FE LA KC L + E W WL N+++S+ SAT +A LL +YL+++ QN+ H V +K LS LP+WLI YK + AELL LY+ YD++ EA +L Y+DAVLG G + FG+ L AT P VWLPY++ DQ+L+ L N N L Q++ KLE+Y +++ + D Sbjct: 79 YSESAGGFYYVESGKLFSVTRNRFIHWKTSGDTLELMEESLDINLLNNAIRLKFQNCSVLPGGVYVSETQNRVIILMLTNQTVHRLLLPHPSRMYRSELV---VDSQMQSIFTDIG------KVDFTDPCNYQLIPAVPGISPNSTASTAWLSSDGEALFALPCASGGIFVLKLPPYDIPGM-VSVVELKQSSVMQRLLTGWMPTAIRGDQSPSDRPLSLAVHCVEHDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPVKKDLRLTAGTGHKLRLAYSPTMGLYLGIYMHAP--KRGQFCIFQLVSTESNRYSLDHISSLFTSQETLIDFALTSTDIWALW-HDAENQTVVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPREMYLQSLFTPGQFTNEALCKALQIFCRGTERNL------DLSWSELKKEVTLAVENELQGSVTEYEFSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLIPSSLVDHLY---LLPYENLLTEDETTISDDVD-IARDVICLIKCLRLIEESVTVDMSVIMEMSCYNLQSPEKAAEQILEDMIT--IDVENVMED----------ICSKLQEIRNPIHAIGLLIREMDY-------ETEVEMEKGFNPAQPLNIRMNLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQLLMRLGDAVIWGTGQLFQAQQDLLHRTAPLLLSYYLIKWGSECLATDVPLDTLESNLQHLSVLELTD-SGALMANRFV-----SSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAITSYLLQLLWPSN-PGCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAASEVG-KEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVIGLPELVIQLATSAITEAGDDWKSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRTLRGLEKQGNCYLAALNCLRLIRPEYAWIVQP-------------VSGAVYDRPGASPKRNHDGECTAAPT-----NRQIEILELEDLEKECSLARIRLTLAQHDPS-AVAVAGSSSAEEMVTLLVQAGLFDTAISLCQTFKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLSTYLERYKVQNNLYH-HCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLVSEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILDKLEDYQQKVDKATRD 1429 The following BLAST results are available for this feature:
BLAST of TCONS_00057570-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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