TCONS_00056171-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056171-protein
Unique NameTCONS_00056171-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length514

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056171-protein ID=TCONS_00056171-protein|Name=TCONS_00056171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
MFAFRRAQNFRRLSSSNNEELSMEMIDRDESQSSKENDPFIQDIEETDVL
KKANGTSNDESTQNFPSVLKRENKPPLLRFAASVKKVRENTGQVVENTEV
DDALLSPSQQTLKKPKTPTTPMKDAATNVKNVKSAVTFMQKASLRSSLKK
KLRKIAEERLTIRQIFRRYVDQSTLHGFRYIVSDSYYVRRFLWACLMILG
AVYFIIKLKQGIIEYFSYPFSTLSTMEYVKESLPLPAITFCSVNQFKLSR
LEESPLMYRLYEENRLPLSRNWSDPGFDISGEELHEQLKNVSLNIDDIFK
HCDWIKRDTAHPLVPPRVCHSGNFTSHFSKSGQICFTLNSGKDNHTKLEV
NHFGINDGYEAMFDFNNQDVIPFEDYTGIHVIIHDPNELPTDKVGFLISP
GFKVYVNLKRVEVNNLEPPYSTKCGEKQLKYYETYSQSACLMEKLTDFVG
EKCGCRELYMPDNNLPYCSLRETFSCAYPMKESFNQYEARLECPIDCQVV
EYQTTITDXLAGQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035363XLOC_035363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056171TCONS_00056171Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPRINTSPR01078AMINACHANNELcoord: 354..372
score: 25.47
coord: 378..396
score: 25.47
coord: 323..339
score: 29.65
coord: 446..463
score: 22.89
coord: 231..247
score: 39.76
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 169..507
e-value: 7.4E-57
score: 193.2
NoneNo IPR availableGENE3D2.60.470.10coord: 222..469
e-value: 4.7E-39
score: 134.0

Blast
[Close]
BLAST of TCONS_00056171-protein vs. Swiss-Prot (Human)
Match: ASIC2 (Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.209e-32
Identity = 95/339 (28.02%), Postives = 156/339 (46.02%), Query Frame = 0 
Query:  169 YVDQSTLHGFRYI-VSDSYYVRRFLWACLMILGAVYFIIKLKQGIIEYFSYPFSTLSTMEYVKESLPLPAITFCSVNQFKLSRLEESPLMYRLYEENRLPLSRNWSDPGF-DISGEE-----------------LHEQLKNVSLNIDDIFKHCDWIKRDTAHPLVPPRVCHSGNFTSHFSKSGQICFTLNSGKDNHTKLEVNHFGINDGYEAMFDFNNQDVIPFEDYT-------GIHVIIHDPNELP-TDKVGFLISPGFKVYVNLKRVEVNNLEPPYS-TKCGEKQLKYYETYSQSACLMEKLTDFVGEKCGCRELYMPDNNLPYCSLRETFSCAYP 479
            + + STLHG R+I V     +RR LWA   +      +++  + +  YFSY   T    E V +SL  PA+T C++N F+ SRL  + L +       L ++    DP   D S  E                 + E L  V  ++ D+  +C +  ++  H           +FT+ F+K G+ C+  NSG+D    L     G  +G E M D    + +P    T       G+ V IH  +E P   ++GF ++PGF+ +V  +   +  L PP+   +  E  L ++  YS +AC ++  T ++ E C CR ++MP  + P+C+  +   CA P
Sbjct:   20 FANTSTLHGIRHIFVYGPLTIRRVLWAVAFVGSLGLLLVESSERVSYYFSYQHVT-KVDEVVAQSLVFPAVTLCNLNGFRFSRLTTNDLYHAGELLALLDVNLQIPDPHLADPSVLEALRQKANFKHYKPKQFSMLEFLHRVGHDLKDMMLYCKFKGQECGHQ----------DFTTVFTKYGK-CYMFNSGEDGKPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFIQELGFGVAPGFQTFVATQEQRLTYLPPPWGECRSSEMGLDFFPVYSITACRIDCETRYIVENCNCRMVHMP-GDAPFCTPEQHKECAEP 345
The following BLAST results are available for this feature:
BLAST of TCONS_00056171-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC21.209e-3228.02Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC... [more]
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