TCONS_00055553-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055553-protein
Unique NameTCONS_00055553-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length200

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055553-protein ID=TCONS_00055553-protein|Name=TCONS_00055553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MPKISKIAVFGAKSVGKTSIIQQIVYGNYSINKMMYPTIADSYDAWVDAD
RGQKERIRIYDLQGQDPDPNFISPSHHIQIADAFILVFSVTSKTSFSVVE
KLRKEIVICRGKDVPIVVLGTKVDMSETRECQHNEVMKWADHEKVKLFEV
FVESRTTLQEPIMYLLKKLPLSAGKRGADVKQKLFGRGQKSKESSTSSES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034939XLOC_034939Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055553TCONS_00055553Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 147..169
score: 13.56
coord: 112..125
score: 37.36
coord: 5..26
score: 30.84
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 6..172
e-value: 2.3E-6
score: -30.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 7..160
e-value: 0.0025
score: -74.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..172
e-value: 2.0E-9
score: 19.3
NoneNo IPR availableGENE3D3.40.50.300coord: 2..200
e-value: 2.1E-26
score: 91.9
NoneNo IPR availablePROSITEPS51419RABcoord: 1..200
score: 13.923
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 4..145
e-value: 1.9E-12
score: 45.3
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 6..169
e-value: 7.6E-24
score: 84.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..172

Blast
[Close]
BLAST of TCONS_00055553-protein vs. Swiss-Prot (Human)
Match: KBRS1 (NF-kappa-B inhibitor-interacting Ras-like protein 1 OS=Homo sapiens GN=NKIRAS1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.600e-39
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = 0 
Query:    1 MPKISKIAVFGAKSVGKTSIIQQIVYGNYSINKMMYPTIADSYDAWVDADRGQKERIRIYDLQGQDPDPNFISPSHHIQIADAFILVFSVTSKTSFSVVEKLRKEIVICRG-KDVPIVVLGTKVDMSETRECQHNEVMKWADHEKVKLFEVFVESRTTLQEPIMYLLKKL 169
            M K  K+ V G  SVGKT+I++Q++YGN++I      T+ D Y A V+ DRG KE++ +YD +G         P H+   AD F+LV+SV +  SF  VE L+KEI   +  K+V IVVLG K+D+SE R+       +WA  EKV+L+EV V  R TL EP   L  KL
Sbjct:    1 MGKGCKVVVCGLLSVGKTAILEQLLYGNHTIGMEDCETMEDVYMASVETDRGVKEQLHLYDTRGLQEGVEL--PKHYFSFADGFVLVYSVNNLESFQRVELLKKEIDKFKDKKEVAIVVLGNKIDLSEQRQVDAEVAQQWAKSEKVRLWEVTVTDRKTLIEPFTLLASKL 168
The following BLAST results are available for this feature:
BLAST of TCONS_00055553-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KBRS15.600e-3944.12NF-kappa-B inhibitor-interacting Ras-like protein ... [more]
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