TCONS_00055513-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00055513-protein
Unique Name	TCONS_00055513-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	284

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00055513-protein ID=TCONS_00055513-protein|Name=TCONS_00055513-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MEIKQIPINNEDLQRFNSDCYTFKEHPLSMLEPYHQVFPSLYMDHHKSFQ
EAEVYEDDVWICTFPKSGTRWMQEIVSCLRNGMDFEKVKTTSLNLRVPFF
DVSAVCSTAEKELKALGSLCKTGAELVNHTPRPRTIKTHLSYEMLPPKIH
EKGAKMINVIRNPRDVCVSFLNHHVLTENYTGDLQTIAEIMLQDVGPLCA
PFFTHILSYWNQRENPNLLIVHYEEMQKDIAGVIKRVAKFIGTEEYSDNQ
IAKLIDHTSVDKMRVNPMVNGTGVIDVITLSSIN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_034922	XLOC_034922	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00055513	TCONS_00055513	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000863	Sulfotransferase_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0008146	sulfotransferase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008146	sulfotransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000863	Sulfotransferase domain	PFAM	PF00685	Sulfotransfer_1	coord: 57..270 e-value: 4.8E-49 score: 167.1
None	No IPR available	GENE3D	3.40.50.300		coord: 4..279 e-value: 6.1E-53 score: 179.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 35..275

Blast

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BLAST of TCONS_00055513-protein vs. Swiss-Prot (Human)
Match: ST1C4 (Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.401e-35
Identity = 78/231 (33.77%), Postives = 124/231 (53.68%), Query Frame = 0

Query:   57 DDVWICTFPKSGTRWMQEIVSCLRNGMDFEKVKTTSLNLRVPFFDVSAVCSTAEKELKALGSLCKTGAELVNHTPRPRTIKTHLSYEMLPPKIHEKGAKMINVIRNPRDVCVSFLNHHVLTENY--TGDLQTIAEIMLQDVGPLC-APFFTHILSYWNQRENPNLLIVHYEEMQKDIAGVIKRVAKFIGTEEYSDNQIAKLIDHTSVDKMRVNPMVNGTGVIDVITLSSIN 284
            DD+ I T+PK+GT W QEIV  ++N  D EK K    + R PF          E ++ +LGS    G E  +  P PR +KTHL + +LPP + EK  K+I V RNP+D  VS+ +   + +     G  +   E  L   G +C   +  H+  +W  ++   +L + YE+M+K+    I+++A+FIG ++  D  + K++ +TS D M+ NPM N + +   I   SI+
Sbjct:   46 DDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFL---------EMKIPSLGS----GLEQAHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFL--AGKVCWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHEIQKLAEFIG-KKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSIS 260

The following BLAST results are available for this feature:

BLAST of TCONS_00055513-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00055513-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ST1C4	2.401e-35	33.77	Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE...	[more]

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TCONS_00055513-protein (polypeptide) - C. hemisphaerica